DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8298 and R11F4.1

DIOPT Version :9

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_494721.1 Gene:R11F4.1 / 173747 WormBaseID:WBGene00020007 Length:502 Species:Caenorhabditis elegans


Alignment Length:527 Identity:177/527 - (33%)
Similarity:275/527 - (52%) Gaps:48/527 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RFLIYSTKNAEVLAYHELKLRQIVHQAGWMEYDPSEIWKNTQECIETAYKNLVILEINPRDIIAI 88
            |||::.....|::..|::::||:....||:|.||.|::.....||....:.|..|.|:..:|.::
 Worm    15 RFLVFEADTGELVTSHQIEVRQLFPHGGWVEMDPMELYDTVVSCISKTIEKLENLGISADEIKSV 79

  Fly    89 GIVNQRGTSVLWNLETGQPLHNAIGWSDCRSTPIL-KTLLHNVRHNVDYVRYRSGLPLSSCFSAL 152
            |:.|||.||::|:.|||:||:|||.|.|.|::.:. :.:......:.|..|.::|||:...||||
 Worm    80 GVANQRETSIVWDKETGKPLYNAIVWLDTRTSSLADEAISRTASKSKDEFRAKTGLPIHPYFSAL 144

  Fly   153 KIRWLMDHVPAVATAIEENKCLFGTLDSWLLWNLTGGVEMGVHSTDITNAHYTSLMNVSTEQWDP 217
            |::||..:||.|..|..:...:|||:|:||:|.||     |.:.||::||..|.|:::...:|..
 Worm   145 KLKWLFQNVPEVKKAYADGNLMFGTVDTWLIWKLT-----GAYVTDVSNASRTLLLDLHKRKWST 204

  Fly   218 KLCQFFRLPLNILPRIRSNSEIFGYVLEGPLHGTPIAAMMGEQPASLLGQLCVKAGQNVCTLDDS 282
            :||:||.||:.|||.|||::|::|:..:|||.|.|::..:|:|.|:::|..|:.|||...|....
 Worm   205 QLCEFFDLPIEILPEIRSSAEVYGHFDKGPLEGVPLSGCLGDQQAAMVGHQCLNAGQTKNTYGTG 269

  Fly   283 CFVLLNTGREKLDSANGLITGIAHKLGEKAATNYTLEGAISNAGSTVTWLRDKLQINTEINSNDN 347
            .|:|.|.|...:.|.|||:|.:..:.|..:...|.|||:.|..|:.|.:|||..:          
 Worm   270 TFMLCNIGTRPIISKNGLLTTVGFQFGADSPVVYALEGSGSIGGNVVRFLRDNFK---------- 324

  Fly   348 VVESLNTFIGENSMISSSCSSSMLNAECGLAAKRSEITFVPAFHGMYAPYWRHDARGIILGLTSQ 412
                   ||.:...:...|.|         ....|...|||:|.|:|.|||...|||.|||||..
 Worm   325 -------FISDAKEMEGLCRS---------VEDTSGAYFVPSFTGLYTPYWDSTARGTILGLTQV 373

  Fly   413 TTAENITQAAYEATGFQIFEVLQAFKRDTPNWDRSSMQPVLTFGGDYAENLHLVQFIADIIGYML 477
            |..|:|..||..|..||..|::.|.::|.   :..:....|...|....|....:..|||:|..:
 Worm   374 TQREHICLAALRAVAFQSAEMIAAVEQDL---EGGTKVTTLKVDGGMIANKLFNEIQADIMGRDI 435

  Fly   478 ERPQTTSPAGLGVMITAGVTMKVVSLEHAVKM------YTPPTDVFSPTTTKNRRELLYKRWAYA 536
            ..|:.|..:|.|..:..|:..:.:||:..::.      |||..|       .|.|.....||..|
 Worm   436 VTPKITEISGWGAAVAGGIGAQQISLDEFLQQSSEDNRYTPQKD-------DNWRSAELARWKEA 493

  Fly   537 VKKCLHW 543
            ||:...|
 Worm   494 VKRSCGW 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 FGGY_GK 12..534 CDD:198347 172/516 (33%)
glycerol_kin 21..543 CDD:273549 176/525 (34%)
R11F4.1NP_494721.1 glycerol_kin 3..500 CDD:273549 176/525 (34%)
FGGY_GK 3..491 CDD:198347 172/516 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157595
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1003
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.800

Return to query results.
Submit another query.