DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8298 and Psmc1

DIOPT Version :10

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_476464.1 Gene:Psmc1 / 117263 RGDID:621097 Length:440 Species:Rattus norvegicus


Alignment Length:79 Identity:15/79 - (18%)
Similarity:26/79 - (32%) Gaps:37/79 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RHNVDYVRYRSGLPLSSCFSALKIRWLMDHVPAVATAIEENKCLFGTLDSWLLWNLTGGVEMGVH 195
            |..||.:|   |.|:|              |..:...|::|..:.                    
  Rat    96 RSKVDDLR---GTPMS--------------VGTLEEIIDDNHAIV-------------------- 123

  Fly   196 STDITNAHYTSLMN 209
            ||.:.:.||.|:::
  Rat   124 STSVGSEHYVSILS 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 15/79 (19%)
Psmc1NP_476464.1 PTZ00361 1..440 CDD:185575 15/79 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.

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