DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and glpG

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:YP_026220.1 Gene:glpG / 947936 ECOCYCID:EG10397 Length:276 Species:Escherichia coli


Alignment Length:298 Identity:65/298 - (21%)
Similarity:108/298 - (36%) Gaps:79/298 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LEYENTRSLILEKARQARFGWWQSRSLADRDYWTQIKQDIRRHWDSLTPGDKMF----------- 148
            ::|..|:.:||...:..:...|    |||.....:::.::.|..::  |.|..:           
E. coli    17 VDYMATQGVILTIQQHNQSDVW----LADESQAERVRAELARFLEN--PADPRYLAASWQAGHTG 75

  Fly   149 ------------------API-----LLCNLVAFAMWRVPALKSTMITYFTSNPAAKVVCWPMFL 190
                              .|:     :.|.:|..||..:...:..:...:..:|..|...|..|.
E. coli    76 SGLHYRRYPFFAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFT 140

  Fly   191 STFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMS--VLYKAATSQAGMSL 253
            ....|:|.||:..|:........|....||..:.:.:.|    .|:|:|  |..|.:....|   
E. coli   141 HALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITL----ISALLSGYVQQKFSGPWFG--- 198

  Fly   254 GASGAIMTLLAYVCTQ-YPDTQLSILFLPALTFSAGAGIKVLMG-IDFA--GVVMGWKFFDHAAH 314
            |.||.:..|:.||..: ..|.|              :||.:..| |.||  .:|.||  ||    
E. coli   199 GLSGVVYALMGYVWLRGERDPQ--------------SGIYLQRGLIIFALIWIVAGW--FD---- 243

  Fly   315 LGGAMFGIFWATYGAQIWAKRIGL-LNYYHDLRRTKQK 351
                :||:..|. ||.|....:|| :.:...|...|:|
E. coli   244 ----LFGMSMAN-GAHIAGLAVGLAMAFVDSLNARKRK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 39/146 (27%)
glpGYP_026220.1 PRK10907 1..276 CDD:182828 64/296 (22%)

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