DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and RBL2

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_176500.1 Gene:RBL2 / 842616 AraportID:AT1G63120 Length:317 Species:Arabidopsis thaliana


Alignment Length:282 Identity:58/282 - (20%)
Similarity:93/282 - (32%) Gaps:114/282 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 HWDS-LTPGDKMFAPILLCNLVAFAMWRVPALKSTMITYFTSNPAAKVV-----CWPMFLSTFS- 194
            ||.| |.|.      |::.||..|           :...|.::...|:.     |...||..|| 
plant    30 HWTSWLIPA------IVVANLAVF-----------IAVMFVNDCPKKITGPNKECVARFLGRFSF 77

  Fly   195 ------------------------------------------HYSAMHLFANMYVMHSFANAAAV 217
                                                      |...:||..||..:.........
plant    78 QPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQ 142

  Fly   218 SLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQ-------YPD--- 272
            ..|..:...:||.:|:..|::|.|:    .|..:|:|||||:..||..:.::       |.:   
plant   143 QFGFIRVGLIYLISGLGGSILSSLF----LQESISVGASGALFGLLGAMLSELLTNWTIYANKAA 203

  Fly   273 TQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAHLGGAMFG-------IFWATYGAQ 330
            ..:::||:.|:..:.|...:|                |:.||:||.:.|       :....||  
plant   204 ALITLLFIIAINLALGMLPRV----------------DNFAHIGGFLTGFCLGFVLLVRPQYG-- 250

  Fly   331 IW-AKRIGLLNYYHDLRRTKQK 351
             | |.|.       :..|||:|
plant   251 -WEASRT-------NTSRTKRK 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 37/200 (19%)
RBL2NP_176500.1 Rhomboid 104..247 CDD:426384 33/162 (20%)

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