DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and RBL12

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_564058.1 Gene:RBL12 / 838441 AraportID:AT1G18600 Length:336 Species:Arabidopsis thaliana


Alignment Length:287 Identity:75/287 - (26%)
Similarity:118/287 - (41%) Gaps:61/287 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 AAAEQNTPVPVNNVIKA-VAFTGA-FTVGCFAGATILEYENTRSLILEKARQARFGWWQSRSLAD 123
            |:|..|..|.:.|:::: |.|.|: |....|      |::             ||..:|.|.   
plant    80 ASALGNKAVKLGNLVESRVGFIGSQFPKKGF------EFQ-------------RFSGFQRRG--- 122

  Fly   124 RDYWTQIKQDIRRHW-DSLTPGDKMFAPILLCNLVAFAMWRVPALKSTMITYFTSNPAAKV-VCW 186
               |        :|| ..|:..|.:.. :::.|...|.||||...:..|..:..|....|. ...
plant   123 ---W--------KHWLQGLSDRDVVLG-LVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLH 175

  Fly   187 PMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVL---YKAATSQ 248
            .:..|.|||....|:.:||..::.|..:.|.:.|.:..|.:||:..:..|:..::   |.||||.
plant   176 TLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAYMAATSP 240

  Fly   249 AGM-----------SLGASGAIMTLLAYVCTQYPDTQLSILF---LPALTFSAGAGIKVLMGIDF 299
            .|.           .||||||:..::......:|...|.:.|   :||:..    || .|:|.|.
plant   241 KGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLL----GI-FLIGKDI 300

  Fly   300 AGVVMGWKFFDHAAHLGG-AMFGIFWA 325
            ..:..|......:||||| |:..|.||
plant   301 LRITEGNSNISGSAHLGGAAVAAIAWA 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 46/158 (29%)
RBL12NP_564058.1 GlpG 135..318 CDD:440469 49/188 (26%)

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