DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rho-7 and RBL3

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_196342.1 Gene:RBL3 / 830616 AraportID:AT5G07250 Length:346 Species:Arabidopsis thaliana


Alignment Length:138 Identity:36/138 - (26%)
Similarity:61/138 - (44%) Gaps:14/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 WPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAG 250
            |.:....:.|...:||.|||..:...........|..:...:||.:|:..|::|.|:    .:..
plant   135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLF----IRNS 195

  Fly   251 MSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAG-AGIKVLMGIDFAGVVMG-WKFFDHAA 313
            :|:|||||:..||.        :.||.||.....:|.. |.:..|:.:....:.:| ....|:.|
plant   196 ISVGASGALFGLLG--------SMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFA 252

  Fly   314 HLGGAMFG 321
            |:||.:.|
plant   253 HVGGFVTG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 36/138 (26%)
RBL3NP_196342.1 Rhomboid 128..271 CDD:426384 36/138 (26%)

Return to query results.
Submit another query.