DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and parla

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001014320.1 Gene:parla / 541485 ZFINID:ZDB-GENE-050327-8 Length:383 Species:Danio rerio


Alignment Length:347 Identity:141/347 - (40%)
Similarity:202/347 - (58%) Gaps:33/347 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RINSGHPAARSCRQIHSNRKQSSNLKPTTGEPAAAEQNTPVP-----------VNNVIKAVAFTG 82
            |:|. ||..| |....:.|...|.......|..|...|..||           .:.:.:.:.||.
Zfish    27 RLNI-HPQQR-CGFRKTERPSESKKGVQETEAEAGGHNRAVPPKPVPPLPPRRPHQLFRPLVFTV 89

  Fly    83 AFTVGC-FAGATILEYENTRS---LILEKARQAR-------------FGWWQSRSLADRDYWTQI 130
            .|| || |..|.||:||:.:|   |.:|:|::.:             ..||...|...:.....|
Zfish    90 GFT-GCSFGAAAILQYESVKSRVQLAIEEAKEEKRDTLLEGHDTTYWHNWWNQLSNFQKQVILLI 153

  Fly   131 KQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRVPALKSTMITYFTSNPAAKVVCWPMFLSTFSH 195
            .. :...|..|:.|.|....|:..|.|....|||||::..::.|||||||:|..|.||.||:|||
Zfish   154 SA-VDDFWSGLSEGQKTVTGIIALNTVVLCCWRVPAMQRFLVKYFTSNPASKTRCLPMVLSSFSH 217

  Fly   196 YSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIM 260
            ||.:|:..||||:.:|:::....||:|||||:|||.||.|:.:|.::|.||.:.|.||||||:||
Zfish   218 YSVIHMVVNMYVLWTFSSSIVSLLGREQFLALYLSGGVISTFVSYVFKTATGRLGPSLGASGSIM 282

  Fly   261 TLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAHLGGAMFGIFWA 325
            |:||.|||:.|:.:|.|:.||.::||||..:|.|:.:|.||:|:||:|||||||||||:||:::.
Zfish   283 TVLAAVCTKIPEAKLGIVLLPVISFSAGNALKALVALDIAGLVLGWRFFDHAAHLGGALFGVWYI 347

  Fly   326 TYGAQ-IWAKRIGLLNYYHDLR 346
            .||.: ||.||..|:.::|:||
Zfish   348 GYGHELIWRKREPLIKFWHELR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 77/140 (55%)
parlaNP_001014320.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..75 9/40 (23%)
Rhomboid 210..347 CDD:279958 76/136 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578095
Domainoid 1 1.000 182 1.000 Domainoid score I3398
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I3197
OMA 1 1.010 - - QHG45264
OrthoDB 1 1.010 - - D1554324at2759
OrthoFinder 1 1.000 - - FOG0005057
OrthoInspector 1 1.000 - - otm24431
orthoMCL 1 0.900 - - OOG6_101864
Panther 1 1.100 - - O PTHR43731
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1980
SonicParanoid 1 1.000 - - X3580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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