DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and Parl

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001005767.1 Gene:Parl / 381038 MGIID:1277152 Length:377 Species:Mus musculus


Alignment Length:298 Identity:136/298 - (45%)
Similarity:195/298 - (65%) Gaps:28/298 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 TPVPVNNVIKAVAFTGAFTVGC-FAGATILEYENTRSLI-----------LEKARQARFGWWQSR 119
            :|.|:..::|...||..|| || |..|.|.:||:.:|.:           |:..|..:.|     
Mouse    89 SPYPIRTLVKPFFFTIGFT-GCAFGSAAIWQYESLKSRVQSYFDGIKADWLDSIRPQKEG----- 147

  Fly   120 SLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRVPALKSTMITYFTSNPAAKVV 184
                     .::::|.:.|:||:.|.:....|:..|.:.|.:||||:|:.|||.|||||||:||:
Mouse   148 ---------NLRKEINKWWNSLSDGQRTVTGIIAANALVFCLWRVPSLQRTMIRYFTSNPASKVL 203

  Fly   185 CWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQA 249
            |.||.||||||:|..|:.|||||:.||:::....||:|||:||||||||.|:.:|.:.|.||.:.
Mouse   204 CSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRY 268

  Fly   250 GMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAH 314
            |.||||||||||:||.|||:.|:.:|:|:|||..||:||..:|.::.:|.||:::||||||||||
Mouse   269 GPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAH 333

  Fly   315 LGGAMFGIFWATYGAQ-IWAKRIGLLNYYHDLRRTKQK 351
            ||||:|||::.|||.: ||..|..|:..:|::|....|
Mouse   334 LGGALFGIWYITYGHELIWKNREPLVKIWHEIRTNGPK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 82/140 (59%)
ParlNP_001005767.1 Rhomboid 207..348 CDD:279958 83/140 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834990
Domainoid 1 1.000 179 1.000 Domainoid score I3529
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10239
Inparanoid 1 1.050 268 1.000 Inparanoid score I3013
Isobase 1 0.950 - 0 Normalized mean entropy S2377
OMA 1 1.010 - - QHG45264
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005057
OrthoInspector 1 1.000 - - oto93582
orthoMCL 1 0.900 - - OOG6_101864
Panther 1 1.100 - - LDO PTHR43731
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1980
SonicParanoid 1 1.000 - - X3580
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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