DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and Parl

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001030326.1 Gene:Parl / 287979 RGDID:1306191 Length:377 Species:Rattus norvegicus


Alignment Length:384 Identity:153/384 - (39%)
Similarity:216/384 - (56%) Gaps:59/384 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SWLPQVARRCHANVNVPILRINSGHPAARSCRQIHSN------------RKQSSNLKP---TTGE 59
            ||: |...|| .....|:|.......:|...||:...            ||....::|   .||.
  Rat     5 SWV-QRGWRC-GQTWAPLLGGGYRELSATQARQLLGRRFNLLLQQKCGFRKAPRKVEPRRSDTGS 67

  Fly    60 PAAAEQN--------------TPVPVNNVIKAVAFTGAFTVGC-FAGATILEYENTRSLI----- 104
            ...|.:.              :|.||..::|...||..|| || |..|.|.:||:.:|.:     
  Rat    68 SGEAYKRSALIPPLEETVFYPSPYPVRTLLKPFFFTVGFT-GCAFGSAAIWQYESLKSRVQSYFD 131

  Fly   105 ------LEKARQARFGWWQSRSLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWR 163
                  |:..|..:.|              .::::|.:.|:||:.|.:....|:..|.:.|.:||
  Rat   132 GIKADWLDSIRPQKEG--------------NLRKEINKWWNSLSDGQRTVTGIIAANALVFCLWR 182

  Fly   164 VPALKSTMITYFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVY 228
            ||:|..|||.|||||||:||:|.||.||||||:|..|:.|||||:.||:.:....||:|||:|||
  Rat   183 VPSLHRTMIRYFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVY 247

  Fly   229 LSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKV 293
            |||||.|:.:|.:.|.||.:.|.||||||||||:||.|||:.|:.:|:|:|||..||:||..:|.
  Rat   248 LSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKA 312

  Fly   294 LMGIDFAGVVMGWKFFDHAAHLGGAMFGIFWATYGAQ-IWAKRIGLLNYYHDLRRTKQK 351
            ::.:|.||:::||||||||||||||:|||::.|||.: ||..|..|:..:|::|....|
  Rat   313 IIAMDTAGMILGWKFFDHAAHLGGALFGIWYITYGHELIWKNREPLVKIWHEIRTNGPK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 82/140 (59%)
ParlNP_001030326.1 Rhomboid 207..348 CDD:396315 83/140 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338580
Domainoid 1 1.000 179 1.000 Domainoid score I3454
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10239
Inparanoid 1 1.050 268 1.000 Inparanoid score I2953
OMA 1 1.010 - - QHG45264
OrthoDB 1 1.010 - - D1554324at2759
OrthoFinder 1 1.000 - - FOG0005057
OrthoInspector 1 1.000 - - oto97119
orthoMCL 1 0.900 - - OOG6_101864
Panther 1 1.100 - - LDO PTHR43731
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3580
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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