DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and rho-5

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_995679.1 Gene:rho-5 / 2768944 FlyBaseID:FBgn0041723 Length:1429 Species:Drosophila melanogaster


Alignment Length:127 Identity:31/127 - (24%)
Similarity:50/127 - (39%) Gaps:10/127 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 MFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMS 252
            :..|...|...:||...:...|.|.......:|..:...||:.:|...:|.|.:......:.|.|
  Fly  1096 LLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFAGNLTSAILVPHRPEVGPS 1160

  Fly   253 LGASGAIMTLLA---YVCTQYPDTQLSILFLPALTFSAGAGIKVL------MGIDFAGVVMG 305
            ...||.:.:|:|   ::..:|.......||...|..|...||..|      :|: .|||:.|
  Fly  1161 ASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGIGTLPYQLNFLGL-LAGVICG 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 31/127 (24%)
rho-5NP_995679.1 Rhomboid 1090..1225 CDD:426384 31/127 (24%)

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