DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and SPBP4H10.10

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_596184.1 Gene:SPBP4H10.10 / 2541325 PomBaseID:SPBP4H10.10 Length:392 Species:Schizosaccharomyces pombe


Alignment Length:312 Identity:73/312 - (23%)
Similarity:113/312 - (36%) Gaps:110/312 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 WTQIKQDIRR-------HWD-SLTPGDKMFAP-------ILLC--NLVAFAMW---RVPALK--- 168
            |:.|.:..||       |:. |..||:...:|       :::|  |.|.|..|   |..|::   
pombe    82 WSPIPKGPRRFLLPPKFHYRLSPPPGEFKSSPRVAIMVAVIVCLVNGVVFWHWDLARDEAIRLHD 146

  Fly   169 STMITYFTSNPAAKVV------CWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAV 227
            .....:..::..|.:.      .|.:.:|.|||.:..||..|...::||.:......|..:.|:|
pombe   147 FKRFRFMMTHAQASLFNLYEGRWWTLVVSIFSHQNLAHLLVNCVAIYSFLSIVVYKFGVWKALSV 211

  Fly   228 YLSAGVFSSLMSV-------------------------------------LY-----------KA 244
            ||.||||.:.:::                                     ||           :.
pombe   212 YLGAGVFGNYVALQRMMNEENPFATLPNGPTKVWDLLFPKGPYPPISRPALYLGSNPEYGPIIRT 276

  Fly   245 AT----SQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAG---- 301
            ||    |.|...||||||:....|.....:|.|:..:.|:    :...|||  .|.:||..    
pombe   277 ATFVPQSWATGLLGASGAVYATAAIFACLFPYTEFFLFFV----YPVKAGI--FMPLDFIAEYVL 335

  Fly   302 VVMGW--KF---FDHAAHLGGAMFGI---------FW---ATYGAQIWAKRI 336
            .::.:  ||   ||  ||:.|..||:         .|   :.|...|..|||
pombe   336 CLLNYEKKFHVAFD--AHVSGTFFGVVSSLFLLPAMWKRRSLYCVGIVKKRI 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 51/213 (24%)
SPBP4H10.10NP_596184.1 GlpG 94..384 CDD:223777 66/297 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43731
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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