DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rho-7 and SPBC13E7.11

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_596266.2 Gene:SPBC13E7.11 / 2540108 PomBaseID:SPBC13E7.11 Length:298 Species:Schizosaccharomyces pombe


Alignment Length:201 Identity:73/201 - (36%)
Similarity:102/201 - (50%) Gaps:16/201 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 TPGDKMFAPILLCNLVAFAMWRVPA---LKSTMITYFTSNPAAKVVCWP-MFLSTFSHYSAMHLF 202
            |....:...|:..|:..||:||.|.   |...:..|...||.  .:..| |.:|.|||.|..||.
pombe    74 TSSRSLVLSIIGINVGVFALWRAPRFSHLNRFLQKYAVMNPI--FINMPSMIVSAFSHQSGWHLL 136

  Fly   203 ANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLY---KAATSQAGMSLGASGAIMTLLA 264
            .||...:|||.|.....|..||:|.|:|:.:||::.|:|:   :..|.....||||||||..:.|
pombe   137 FNMVAFYSFAPAIVDVFGNNQFVAFYISSILFSNVASLLHHRLRFGTKVTPGSLGASGAIYAIAA 201

  Fly   265 YVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVV-MGWKFF------DHAAHLGGAMFGI 322
            .....:|:..:||:|||.:....|..:..||..|..|:: .|:..|      ||||||||.:||.
pombe   202 ATSYFFPNASVSIIFLPFIPIKIGVALLGLMAFDAWGLISRGFSSFANFTLIDHAAHLGGGIFGW 266

  Fly   323 FWATYG 328
            .:|.||
pombe   267 LYAKYG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 59/151 (39%)
SPBC13E7.11NP_596266.2 Rhomboid 122..269 CDD:279958 57/146 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 100 1.000 Domainoid score I1828
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10239
Inparanoid 1 1.050 108 1.000 Inparanoid score I1593
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005057
OrthoInspector 1 1.000 - - oto101263
orthoMCL 1 0.900 - - OOG6_101864
Panther 1 1.100 - - LDO PTHR43731
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1980
SonicParanoid 1 1.000 - - X3580
TreeFam 1 0.960 - -
1211.850

Return to query results.
Submit another query.