DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and rom-5

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001379293.1 Gene:rom-5 / 190260 WormBaseID:WBGene00004404 Length:333 Species:Caenorhabditis elegans


Alignment Length:306 Identity:102/306 - (33%)
Similarity:164/306 - (53%) Gaps:27/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NRKQSSNLKPTT-----GEPAAAEQNTPVPVNNVIKAVAFTGAFTVGCFAGATILEYENTRSLIL 105
            :|.:...||..|     .:..:.:..|..|::::.||:.||.|..|..|:.|.:.:..|.|    
 Worm    32 DRLRQQELKELTKNHQIKQAFSPDARTVRPMSDLWKALQFTLATGVTTFSIAIVADSWNRR---- 92

  Fly   106 EKARQARFGWWQSRSLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRVPALKST 170
            ::.|.|....:.:..     |:.:.|.:....: .||.|:|..|.::..|:|.:.||:..:|...
 Worm    93 KEERTAPINVFDAVK-----YYFEPKVEAGIEY-KLTNGEKHLALLIGLNVVVYLMWKGKSLNPF 151

  Fly   171 MITYFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFA-NAAAVSLGKEQFLAVYLSAGVF 234
            |..|||::.|:|.:|.||.||.|||.|.:||..||||:.:|| :.....:|.|||.:.|::|.|.
 Worm   152 MTRYFTNSYASKSLCSPMLLSAFSHSSIIHLGLNMYVLSTFAPHIIEKFMGVEQFWSFYVTAAVV 216

  Fly   235 SSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDF 299
            ||.:|::.||.......:|||||||:..|.|.|.|.||.:||::|:|...|||...:..::..|.
 Worm   217 SSFVSIVDKAVVRSPIRALGASGAILAALTYTCMQIPDGRLSLVFIPNFDFSAQNAVYGIIAFDL 281

  Fly   300 AGVVMGWKFFDHAAHLGGAMFGI---------FWATYGAQIWAKRI 336
            .|:::.::.|||||||||::||:         .|..||.  |.:.:
 Worm   282 LGLLLRFRLFDHAAHLGGSLFGVGYALFLQDALWEKYGE--WLENL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 62/150 (41%)
rom-5NP_001379293.1 GlpG 131..310 CDD:440469 73/178 (41%)

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