DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and rho-4

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_318085.4 Gene:rho-4 / 1278488 VectorBaseID:AGAMI1_004111 Length:361 Species:Anopheles gambiae


Alignment Length:396 Identity:75/396 - (18%)
Similarity:120/396 - (30%) Gaps:141/396 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RCHANVN-VPILRINSGHPAARSCRQIHSNRKQSSN---------LKPTTGEPAAAEQNTPVPVN 72
            ||..:|. :|:.|:|:.....|.....|...|..|:         :|....|...|:    :|.:
Mosquito     3 RCEQHVQAIPLQRLNTREEHQRRQHLRHVFEKYDSDSDGYLNIVEMKHLIHEKKCAD----MPKD 63

  Fly    73 NVIKAVAFTGAFTVGCFAGATILEYENTRSLILE------------------KARQARFGWWQSR 119
            ..:..:..:.....|      .|::|....|.||                  |...|..|     
Mosquito    64 LALHLLKLSDTNNDG------RLDFEEFYKLSLEHPYFLCEMYIKYCKAVVPKRNDAEEG----- 117

  Fly   120 SLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRV-------PALKSTMITYFTS 177
            .:.|.:|...:|         |.|...|.....:..::.|.:..|       .:....|.|.|..
Mosquito   118 DVLDGEYEQSMK---------LWPPPLMMIIFSIMEIIFFVIDIVKTQDQNGTSTSGPMATLFIY 173

  Fly   178 NPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLY 242
            ||..:...|......|.|...|||..|:.|.                  ::|  ||...|:...:
Mosquito   174 NPHLRHEVWRFLTYMFVHIGFMHLIMNLLVQ------------------IFL--GVALELVHCWW 218

  Fly   243 KAA-TSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGA--GIKVLMGIDFAGVVM 304
            :.| ...||:..|:.|                  :.||.|.: |.|||  |:..|:....|.::|
Mosquito   219 RVALVYLAGVVAGSMG------------------TSLFTPRV-FLAGASGGVYALITAHIATIIM 264

  Fly   305 GWKFFDHA---------------------------------AHLGGAMFGIFWATYG------AQ 330
            .||..::|                                 ||..||:.| |....|      .:
Mosquito   265 NWKQMEYAIVQLFVFLVFCVTDLGVSIYNSINDPFDKVGYIAHASGALAG-FLVGIGVLRNLKVE 328

  Fly   331 IWAKRI 336
            .|.:::
Mosquito   329 SWERKL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 37/176 (21%)
rho-4XP_318085.4 EFh 27..88 CDD:238008 10/70 (14%)
Rhomboid 177..323 CDD:426384 38/185 (21%)

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