DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rho-7 and rho-7

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_312303.5 Gene:rho-7 / 1273337 VectorBaseID:AGAMI1_005948 Length:360 Species:Anopheles gambiae


Alignment Length:374 Identity:175/374 - (46%)
Similarity:237/374 - (63%) Gaps:40/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LMSRALCR--------SWLPQVARRCHANVNVPILRINSGHPAARSCRQIHSNRKQSSNLKPTTG 58
            |:|..:||        |:||. .|:|.|         .||     |.||: :..:.|.|.:..|.
Mosquito     3 LLSVLICRTGPAVIRSSFLPH-TRQCLA---------RSG-----SDRQL-TIARYSRNARNNTR 51

  Fly    59 EPAAAEQNTPVPV--------------NNVIKAVAFTGAFTVGCFAGATILEYENTRSLILEKAR 109
            ..:.|.:.|.||.              :.:.:::.||.||:.|.|.|.:|.|||..||..::..|
Mosquito    52 TESFAPRETIVPTEVQGIVVESGYIDPSKIWRSLLFTAAFSTGSFIGVSIWEYETIRSRAMQALR 116

  Fly   110 -QARFGWWQSRSLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRVPALKSTMIT 173
             :....|::.|....|....|.::|:...|:.|:||:::||||...|::.:.:||:|:|..||:.
Mosquito   117 SKLSVNWFKERMKHQRQEMEQWRKDLTGWWNKLSPGERIFAPICALNVIVYGLWRIPSLAPTMVK 181

  Fly   174 YFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLM 238
            ||.||||||.||||||||||||||..|:.|||||:|||::||..:||:||||.|||||||.:|..
Mosquito   182 YFASNPAAKAVCWPMFLSTFSHYSLFHILANMYVLHSFSHAAVATLGREQFLGVYLSAGVIASFA 246

  Fly   239 SVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVV 303
            |.::|..|.|.|:||||||.||.:|||||:|||||||||||||..||||||.|||:||||.|||:
Mosquito   247 SHVFKTVTRQPGLSLGASGTIMGILAYVCSQYPDTQLSILFLPMYTFSAGAAIKVIMGIDLAGVL 311

  Fly   304 MGWKFFDHAAHLGGAMFGIFWATYGAQ-IWAKRIGLLNYYHDLRRTKQK 351
            :||:.||||||||||:||:||..:|:| :|..|...:.|:|:||...:|
Mosquito   312 LGWRIFDHAAHLGGALFGLFWCHFGSQNVWPLREYFVGYWHELRGPPKK 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 100/140 (71%)
rho-7XP_312303.5 None

Return to query results.
Submit another query.