DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and LOC1269249

DIOPT Version :10

Sequence 1:NP_523704.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_307868.5 Gene:LOC1269249 / 1269249 VectorBaseID:AGAMI1_000914 Length:384 Species:Anopheles gambiae


Alignment Length:370 Identity:73/370 - (19%)
Similarity:113/370 - (30%) Gaps:130/370 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PAARSCRQIHSNRKQSSNLKPTTGEPAAAEQNTPVPVNNVIKAVAFTGAFTVGCFAGATILEYEN 99
            |.||.. .:|.. |.::..:|.|.:.|..|.:.|..|....:...|.||......:..:.||.|.
Mosquito     9 PPARIV-PVHRG-KATTTTEPDTCQRAWMESDRPDRVPPESEREPFLGASGGSDGSETSSLECER 71

  Fly   100 --TRSLILEKAR-----QARFGWWQSR---------------------SLADRDYW----TQIKQ 132
              |..:..:|||     ..|.|....:                     |.:|...|    |..|.
Mosquito    72 LCTAQVFPKKARIFSIDLERGGGGHGKTSGQVTPSGSVGSGDCTSNDDSHSDAKLWAGGPTNRKA 136

  Fly   133 DIRRHWDSLTPGDKMFAPILLCNLVAFAMWRVP-------ALKSTMITYFTS--------NPAAK 182
            :.|:.   ..|..::   :.||..   ..|.||       ||:.|..||...        :|..:
Mosquito   137 NRRKR---KRPASRL---LQLCQC---CPWTVPWSLLIVSALQITAFTYSNDAINQKLIFSPVKQ 192

  Fly   183 VVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATS 247
            ...|.....||.|..::||..|:.:....|.......|..:.|.||. ||:.:.           
Mosquito   193 YEVWRFVTYTFLHAGSVHLVLNIIIQLLVAFPLETEQGHGKVLLVYF-AGIVAG----------- 245

  Fly   248 QAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDH- 311
                .||||                     :|.|:|...|.||:..|:......::|.::...: 
Mosquito   246 ----GLGAS---------------------VFEPSLMVGASAGVYCLLMSHIPHIMMNFRTLSYR 285

  Fly   312 ----------------------------------AAHLGGAMFGI 322
                                              |||:.||:.|:
Mosquito   286 YYRLIAVLMLCISDVLYSIRHCLTKGNLQPRIGVAAHISGALCGL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_523704.1 Rhomboid 186..327 CDD:426384 32/172 (19%)
LOC1269249XP_307868.5 None

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