DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-7 and parl

DIOPT Version :9

Sequence 1:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001165755.1 Gene:parl / 100036610 XenbaseID:XB-GENE-5836292 Length:353 Species:Xenopus tropicalis


Alignment Length:313 Identity:142/313 - (45%)
Similarity:194/313 - (61%) Gaps:32/313 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSNLKPTTGEPAAAEQNTPVP---VNNVIKAVAFTGAFTVGC-FAGATILEYENTRSLI------ 104
            |..:|.:...| .||..:|..   |..:.|...||..|: || |..|.|.:||..:|.:      
 Frog    48 SEAMKSSFTSP-MAEAMSPARSYLVRQLYKPFLFTLGFS-GCSFGVAAIWQYETLKSRMKSYLDD 110

  Fly   105 -----LEKARQARFGWWQSRSLADRDYWTQIKQDIRRHWDSLTPGDKMFAPILLCNLVAFAMWRV 164
                 |||.|..:.|              ..::.:...|:||:.|.|..:.|::.|.:.|.:|||
 Frog   111 IQADWLEKLRPPKHG--------------AFRKQVNEWWNSLSEGQKTVSGIIVLNGLVFCLWRV 161

  Fly   165 PALKSTMITYFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYL 229
            |:|:.|||.|||||||::.:|.||..|||||:|..|:.|||||:.||:.:....|||||||||||
 Frog   162 PSLQRTMIRYFTSNPASRSLCLPMIFSTFSHFSLFHMAANMYVLWSFSTSIVSILGKEQFLAVYL 226

  Fly   230 SAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVL 294
            |||..|:.:|.:.|.||.:.|.||||||||||:||.|||:.|:.:|:|:|||..||:||..:|.:
 Frog   227 SAGTVSTFISYVSKIATGRFGPSLGASGAIMTILAAVCTKMPEAKLAIIFLPMFTFTAGNALKAI 291

  Fly   295 MGIDFAGVVMGWKFFDHAAHLGGAMFGIFWATYGAQ-IWAKRIGLLNYYHDLR 346
            |.||.||::|||:|||||||||||:|||::|.||.: ||.||..|:..:|:.|
 Frog   292 MAIDAAGLIMGWRFFDHAAHLGGALFGIWYALYGNELIWRKREPLVKMWHEFR 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 85/140 (61%)
parlNP_001165755.1 Rhomboid 185..324 CDD:366759 84/138 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3485
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10239
Inparanoid 1 1.050 256 1.000 Inparanoid score I3081
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1554324at2759
OrthoFinder 1 1.000 - - FOG0005057
OrthoInspector 1 1.000 - - oto103815
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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