DRSC/TRiP Functional Genomics Resources

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Protein Alignment RnrS and nrdB

DIOPT Version :10

Sequence 1:NP_525111.1 Gene:RnrS / 36280 FlyBaseID:FBgn0011704 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_416738.1 Gene:nrdB / 946732 ECOCYCID:EG10661 Length:376 Species:Escherichia coli


Alignment Length:373 Identity:89/373 - (23%)
Similarity:159/373 - (42%) Gaps:65/373 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQ-MYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
            |.|..|...||:....|.....:..|.:||:: :.:|..:.||..||||:|:|..|:..|.:.|:
E. coli     7 SQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71

  Fly   129 H-FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPH 192
            | |||: |.:....|.|...:........:.|.|...:.......|.:||..|:.:|...:.|| 
E. coli    72 HIFISN-LKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP- 134

  Fly   193 QREYLFNAIETMPAVKRKADWALSW--------------------ISSKSANFGER--------- 228
              ..:|:.|.|...::::|:...|:                    ::.|:.....|         
E. coli   135 --SVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLC 197

  Fly   229 IIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLV-------Q 286
            :::..|:|.|.|..|||..|...:|.||.|......||:|||.||    :...||::       .
E. coli   198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALH----LTGTQHMLNLLRSGAD 258

  Fly   287 RPKRERIIEIIRD------AVAIEQE------FLTDALPVNLIGMNCDLMSQYIEFVADRLLVEL 339
            .|:...|.|..:.      ..|.:||      ...|.   ::||:|.|::.||:|::.:..:..:
E. coli   259 DPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDG---SMIGLNKDILCQYVEYITNIRMQAV 320

  Fly   340 GVGKIYNTK-NPFNFME--MISLDGKTNFFEKKVGEYQRMGVVSNPLD 384
            |:...:.|: ||..::.  ::|.:.:....|.:|..| .:|.:.:.:|
E. coli   321 GLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSY-LVGQIDSEVD 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrSNP_525111.1 Ferritin_like 74..393 CDD:469698 86/364 (24%)
nrdBNP_416738.1 nrdB 1..376 CDD:181647 89/373 (24%)

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