DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RnrS and rrm2b

DIOPT Version :9

Sequence 1:NP_525111.1 Gene:RnrS / 36280 FlyBaseID:FBgn0011704 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001007164.1 Gene:rrm2b / 368909 ZFINID:ZDB-GENE-030616-614 Length:349 Species:Danio rerio


Alignment Length:370 Identity:251/370 - (67%)
Similarity:299/370 - (80%) Gaps:21/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LTDSTNNVRKMSIGHEANGQLAKESSTVNGIGKSANSLMEKSVTPFDPSLEPLLRENPRRFVIFP 88
            :...|:|...:..|::            ||         .|.|.|.....||||||||:||||||
Zfish     1 MNSCTSNTPTVITGYQ------------NG---------HKDVDPNSVEDEPLLRENPKRFVIFP 44

  Fly    89 IQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISHVLAFFAASDGIVNENLVERF 153
            |||.|||:|||:|:||||||||||||||||.|..||.:|:||||||||||||||||||||||:||
Zfish    45 IQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKHFISHVLAFFAASDGIVNENLVQRF 109

  Fly   154 SQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWI 218
            |||||:.|||.||||||.:|||||||||:||:|||||..:|:|||||::|||.|:|||||||.||
Zfish   110 SQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWI 174

  Fly   219 SSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQH 283
            |..::.||||::|||||||||||||||:|:||||||||||||:|||||||||||||:||.|::.:
Zfish   175 SDTNSTFGERLVAFAAVEGIFFSGSFAAIYWLKKRGLMPGLTYSNELISRDEGLHCNFACLIYSY 239

  Fly   284 LVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTK 348
            ||::|..:|:.:||..||:|||||||:|||||||||||.||.|||||||||||.:||:.|.|.::
Zfish   240 LVKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSE 304

  Fly   349 NPFNFMEMISLDGKTNFFEKKVGEYQRMGVVSNPLDNVFTLDADF 393
            |||:|||.|||:||||||||:|.||||:||:||..|..|||||||
Zfish   305 NPFDFMESISLEGKTNFFEKRVAEYQRLGVMSNVKDCEFTLDADF 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrSNP_525111.1 Ferritin_like 74..393 CDD:294190 241/318 (76%)
rrm2bNP_001007164.1 Ferritin_like 30..349 CDD:294190 241/318 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586559
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61695
OrthoDB 1 1.010 - - D316743at33208
OrthoFinder 1 1.000 - - FOG0001155
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100537
Panther 1 1.100 - - LDO PTHR23409
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1105
SonicParanoid 1 1.000 - - X1121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.890

Return to query results.
Submit another query.