DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RnrS and Rrm2b

DIOPT Version :9

Sequence 1:NP_525111.1 Gene:RnrS / 36280 FlyBaseID:FBgn0011704 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001124015.1 Gene:Rrm2b / 299976 RGDID:1306045 Length:351 Species:Rattus norvegicus


Alignment Length:320 Identity:250/320 - (78%)
Similarity:285/320 - (89%) Gaps:0/320 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISHVLAFF 138
            |||||::.||||||||||.|||:|||:|:|||||.|||||||||..|::||.:|::||||:||||
  Rat    32 EPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFISHILAFF 96

  Fly   139 AASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIET 203
            ||||||||||||||||||||:.||||||||||.:|||||||||:|||||||||.:||:|||||||
  Rat    97 AASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIET 161

  Fly   204 MPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 268
            ||.||:||||||.||:.:.:.||||::|||||||||||||||:||||||||||||||||||||||
  Rat   162 MPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISR 226

  Fly   269 DEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQYIEFVAD 333
            |||||||||.||||:||.:|..||::|||.|||.|||||||:||||.||||||.||.||||||||
  Rat   227 DEGLHCDFACLMFQYLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMNCVLMKQYIEFVAD 291

  Fly   334 RLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVGEYQRMGVVSNPLDNVFTLDADF 393
            |||.|||..||:..:|||:|||.|||:||||||||:|.||||..|::...||||||||||
  Rat   292 RLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrSNP_525111.1 Ferritin_like 74..393 CDD:294190 248/318 (78%)
Rrm2bNP_001124015.1 Ferritin_like 32..351 CDD:294190 248/318 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345570
Domainoid 1 1.000 460 1.000 Domainoid score I458
eggNOG 1 0.900 - - E1_COG1678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61695
OrthoDB 1 1.010 - - D316743at33208
OrthoFinder 1 1.000 - - FOG0001155
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100537
Panther 1 1.100 - - LDO PTHR23409
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1121
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.760

Return to query results.
Submit another query.