DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and AT5G62620

DIOPT Version :10

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_201068.1 Gene:AT5G62620 / 836383 AraportID:AT5G62620 Length:681 Species:Arabidopsis thaliana


Alignment Length:493 Identity:106/493 - (21%)
Similarity:184/493 - (37%) Gaps:145/493 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WNPEKIEEQSSLLAAEYSSSSGAAASGSEDETVTTSGALR-----------------SKAKL--- 49
            |:.:.:.||::....::.|:.......|.|:..|..|.::                 |||..   
plant   262 WSGKPVIEQNTCYRMQWGSAQRCEGWRSRDDEETVDGQVKCEKWARDDSITSKEEESSKAASWWL 326

  Fly    50 -----RKRQLRNRMPLPRMLRRLGCYTLSAFL------ICGLLLVYLPLVY-------------- 89
                 |.:::....|.|..:.:|...||||.|      :.|..:...|  |              
plant   327 SRLIGRSKKVTVEWPFPFTVDKLFVLTLSAGLEGYHVSVDGKHVTSFP--YRTGFTLEDATGLTI 389

  Fly    90 ---LDVHKRSAG-LPDWTSETSRSIADYLDIGLSSGVIVPKDFCRNKTFLVIAVCTGVDNFIQRH 150
               :|||...|| ||  ||..|.|...:|:  |||....| .....:..:.|.:.:..::|.:|.
plant   390 NGDIDVHSVFAGSLP--TSHPSFSPQRHLE--LSSNWQAP-SLPDEQVDMFIGILSAGNHFAERM 449

  Fly   151 TIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIV---FIVGR 212
            .:|.:|..                                       ..|..|.::|   |:...
plant   450 AVRRSWMQ---------------------------------------HKLVKSSKVVARFFVALH 475

  Fly   213 QKDEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFLKCDDD 277
            .:.|.   |..|.:   |:|.:.||:...::|||:.:.||:|...::.:...  .|.:.:|||||
plant   476 SRKEV---NVELKK---EAEFFGDIVIVPYMDSYDLVVLKTVAICEYGAHQL--AAKFIMKCDDD 532

  Fly   278 TFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSK 342
            |||.:..:|:  .....|.        |||.|:           .::.|.|:     |:.:  .|
plant   533 TFVQVDAVLS--EAKKTPT--------DRSLYI-----------GNINYYHK-----PLRQ--GK 569

  Fly   343 WYMPSYMYKPESYPKYLSGAGYLMSIDV---VQRLFEASLNTTLVYLEDVYITGLCAQKAKINRH 404
            |.:....:..|.||.|.:|.||::|.|:   :.:.||.. ...:..:|||.: |:..:  :.|..
plant   570 WSVTYEEWPEEDYPPYANGPGYILSNDISRFIVKEFEKH-KLRMFKMEDVSV-GMWVE--QFNNG 630

  Fly   405 HHPLFSFAHSKQMCAF---KGTITQHQLKDDSMVSAWN 439
            ..|: .:.||.:.|.|   :..:|.|......|:..|:
plant   631 TKPV-DYIHSLRFCQFGCIENYLTAHYQSPRQMICLWD 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:473923 51/208 (25%)
AT5G62620NP_201068.1 PLN03133 126..681 CDD:215596 106/493 (22%)

Return to query results.
Submit another query.