DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and AT3G06440

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_566284.1 Gene:AT3G06440 / 819820 AraportID:AT3G06440 Length:619 Species:Arabidopsis thaliana


Alignment Length:517 Identity:109/517 - (21%)
Similarity:160/517 - (30%) Gaps:226/517 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ASGSEDETVTTSGALRSKAKLRKRQLRNRMPLPRMLRRLGCYTLSAF-------------LICGL 80
            |.|.|:.|:...| |..:....||...:.| :.:.:||:....::||             |.|||
plant   112 AQGIEEATLAMKG-LVLEINREKRAYSSGM-VSKEIRRICPDFVTAFDKDLSGLSHVLLELPCGL 174

  Fly    81 L------LVYLPLVYLDVHKRS-------AGLPDWTSETSRSIADYLDIGLSSGVIVPKDFCRNK 132
            :      ||.:|    |.|..|       :||   :.||.|.|....::..|...||...:    
plant   175 IEDSSITLVGIP----DEHSSSFQIQLVGSGL---SGETRRPIILRYNVNFSKPSIVQNTW---- 228

  Fly   133 TFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSG-- 195
                              |.:..|||.....|      ||.||.|.:..||...|..|..:|.  
plant   229 ------------------TEKLGWGNEERCQY------HGSLKNHLVDELPLCNKQTGRIISEKS 269

  Fly   196 -------------------EGQSLTASV------------------------------------- 204
                               :|...||::                                     
plant   270 SNDDATMELSLSNANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSG 334

  Fly   205 -----------------------------------RIVFIVG----------------------- 211
                                               ||..:||                       
plant   335 GLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEA 399

  Fly   212 -RQKDEA---MLGNETLNRIHI----ESEKYNDIIQENFVDSYNNLTLKSV----MALKHISRSC 264
             |....|   ::|..|..::::    ||:.|.||....|||.|..|:||:|    :..|.|    
plant   400 VRSGKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVI---- 460

  Fly   265 FNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQ 329
              .|.|.:|.|||.||.|..||:.|                           ..:.||.:|||..
plant   461 --PAKYIMKTDDDAFVRIDELLSSL---------------------------EERPSSALLYGLI 496

  Fly   330 FCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEA--SLNTTLVYLEDV 389
            ..:..|..|..|||::|...:..:|||.:..|.||::|.|:.:.:.:.  ..:..|..||||
plant   497 SFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDV 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 59/295 (20%)
AT3G06440NP_566284.1 PLN03133 19..618 CDD:215596 109/517 (21%)
Gal-bind_lectin 165..343 CDD:278752 37/212 (17%)
Galactosyl_T 385..563 CDD:304462 55/207 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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