DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and b3galt10.1

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001122271.1 Gene:b3galt10.1 / 798349 ZFINID:ZDB-GENE-080722-3 Length:379 Species:Danio rerio


Alignment Length:400 Identity:96/400 - (24%)
Similarity:154/400 - (38%) Gaps:116/400 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RKRQLRNRMPLPRMLRRLGCYTLSAFLICGLLLVYL--PLVYL-DVHKRSAGLPDWTSET-SRSI 110
            |:...::|:|     .|  |:..:.|::. |.|.:|  .:||: |...:||..||...|| ...|
Zfish    12 RRSLAQDRVP-----NR--CHIKTGFILL-LALTFLLSIIVYISDFSLKSAAAPDTLYETVVNQI 68

  Fly   111 ADYLDIGLSSGV-------------------------------------IVPKDFCRNKT-FLVI 137
            ..|.....:|.:                                     :...|.|:.:. |||:
Zfish    69 PSYYVTESASSIDNQTMFSAPTPINNQQRATQNNSEHHHVAHPLNYYFTLDEPDICKQRNPFLVL 133

  Fly   138 AVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTA 202
            .|.........|:.||.||||.|                                 :.:|:::..
Zfish   134 MVPVAPYEVKARNAIRSTWGNET---------------------------------TVQGKAVLT 165

  Fly   203 SVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNT 267
            ...:...||...::|.      .::..||.::.|:||.||||||.|||:|:::.:..::..| ..
Zfish   166 LFLVGLTVGADSEKAQ------QQLEEESRQHRDLIQSNFVDSYFNLTIKTMVIMDWLATRC-PQ 223

  Fly   268 AVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCN 332
            |.|.:|.|.|.|:|:.||:..|.....|          |..|:           :.||..::|. 
Zfish   224 AYYSMKIDSDMFLNVDNLVTLLSAPNTP----------RENYI-----------TGVLMRNRFV- 266

  Fly   333 VVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQ 397
               |...:||||:...:|....||.||.|.||:.|.|:..::.|||.......:||.|| |.|.:
Zfish   267 ---VRNKNSKWYVSEELYPEPKYPTYLLGMGYVFSNDLPSKIVEASNYVKPFNIEDAYI-GACLK 327

  Fly   398 KAKINRHHHP 407
            :..:.....|
Zfish   328 QLGVEPSSPP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 59/202 (29%)
b3galt10.1NP_001122271.1 Galactosyl_T 143..337 CDD:304462 68/259 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592637
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24800
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.710

Return to query results.
Submit another query.