DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and b3gnt2b

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_991315.2 Gene:b3gnt2b / 793362 ZFINID:ZDB-GENE-050913-158 Length:397 Species:Danio rerio


Alignment Length:466 Identity:106/466 - (22%)
Similarity:177/466 - (37%) Gaps:124/466 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAAEYSSSSGAAASGSEDETVTT----SGALRSKAKLRKRQLRNRMPLPRMLRRLGCYTLSAFLI 77
            :..|.|.::|..:|......|..    :..|.|.|...::|.:......|.|.:|. ||:.    
Zfish    21 IVVEVSRNAGKGSSSKNKSLVPLKRFWAKDLPSDAYWNRQQQQINYINNRNLEKLN-YTID---- 80

  Fly    78 CGLLLVYLPLVYLDVHKRSAGLPDWTSET------------SRSIADYLDIG------------L 118
                                .||||.::|            :..:.||..:.            .
Zfish    81 --------------------NLPDWLNDTVSLDSCDPDYRVTTQVKDYNSLPDRFKDFLLYMRCR 125

  Fly   119 SSGVIVPK-DFCRNKTFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPL 182
            |..::|.: :.|:.:.||.:|:.:.|.:|.:|..|||:||..                       
Zfish   126 SYPIVVDQPNICKKQPFLFLAIKSLVPHFDRRQAIRESWGKV----------------------- 167

  Fly   183 PDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVDSYN 247
                          |:....||..||::|....|... .:....:|.||..:.||:|.::.|::.
Zfish   168 --------------GRIANRSVVTVFLLGNAATEDHF-PDLSKMLHHESSIHRDILQWDYRDTFF 217

  Fly   248 NLTLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVT 312
            |||:|.|:.|:.:|..| ..|.:..|.|||.|||..::::||                  |.|..
Zfish   218 NLTIKEVLFLEWLSTRC-PGANFIFKGDDDVFVNTIHIIDFL------------------TNLSN 263

  Fly   313 APQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEA 377
            |      .:.::..|....|..|..:...|:::|..|: ...||.|..|.|||.|..:.|||...
Zfish   264 A------KARELFVGDVITNAGPHRDKKVKYFIPESMF-VGMYPAYAGGGGYLFSGQLAQRLHNI 321

  Fly   378 SLNTTLVYLEDVYITGLCAQKAKINRHHHPLF-SF----AHSKQMCAFKGTITQHQLKDDSMVSA 437
            |....|..::||| ||:|..|..:....|..| :|    .:....||:|..:..|......|:..
Zfish   322 SKLVPLYPIDDVY-TGMCLMKMGLAPEKHKGFRTFDIEEKYRDNACAYKSLMLVHPRSPQHMIKI 385

  Fly   438 WNYVSNYSIKC 448
            |.::::.::.|
Zfish   386 WAWLNDPALNC 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 59/202 (29%)
b3gnt2bNP_991315.2 Galactosyl_T 155..347 CDD:304462 67/256 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24800
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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