DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and B3galt2

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001102962.1 Gene:B3galt2 / 686081 RGDID:1586615 Length:422 Species:Rattus norvegicus


Alignment Length:352 Identity:99/352 - (28%)
Similarity:151/352 - (42%) Gaps:81/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 VIVPKDFCRNKT-FLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDR 185
            :|...:.|:.|: ||::.:.........|..||:||||.|                  |.|    
  Rat   139 IINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGNET------------------LAP---- 181

  Fly   186 LKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLT 250
                       |..:|.    :|::|   ....|.....:.|..||.:|:||||:.::|:|.|||
  Rat   182 -----------GIQITR----IFLLG---ISIKLNGYLQHAIQEESIQYHDIIQQEYLDTYYNLT 228

  Fly   251 LKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQ 315
            :|::|.:..::..|.:|. |.:|.|.|.|||...|::.||...:|         .|..|..    
  Rat   229 IKTLMGMNWVATYCPHTP-YVMKTDSDMFVNTEYLIHKLLKPDLP---------PRHNYFT---- 279

  Fly   316 TRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLN 380
                       |:......|.....||||||..:|..|.||.:.||.||:.|.|:.:::|:.||.
  Rat   280 -----------GYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLG 333

  Fly   381 TTLVYLEDVYITGLCAQKAKINRHHHP-LFSFAH---SKQMCAFKGTITQHQLKDDSMVSAWNYV 441
            ...::|||||: |:|..|.:::....| .|.|.|   |...|.:...||.||.:...::..||::
  Rat   334 IRRLHLEDVYV-GICLAKLRVDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHL 397

  Fly   442 -SNYSIKC-----PPPGRYFSQVRLRK 462
             .|....|     ...|||    |.||
  Rat   398 QQNKHNACVNAAKEKAGRY----RHRK 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 62/202 (31%)
B3galt2NP_001102962.1 Galactosyl_T 165..359 CDD:250845 74/259 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44835
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.880

Return to query results.
Submit another query.