DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and si:dkey-160o24.3

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:XP_021336785.1 Gene:si:dkey-160o24.3 / 558930 ZFINID:ZDB-GENE-140106-224 Length:459 Species:Danio rerio


Alignment Length:355 Identity:97/355 - (27%)
Similarity:152/355 - (42%) Gaps:73/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 VIVPKDFCRN-------KTFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYL 179
            :|.|.|.|.:       ...|::|:.|...||..|..||||||.:            |.:|    
Zfish   165 IIDPSDVCNHGPLAKKWAPMLLLAIKTQTANFENREAIRETWGRS------------GRIK---- 213

  Fly   180 PPLPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVD 244
                          :.:||  ...||.||::|:.|     ..:...::.:||:||.||:|..|.|
Zfish   214 --------------TRDGQ--LKIVRRVFLLGKSK-----SRQHEEKLQLESKKYGDILQWEFTD 257

  Fly   245 SYNNLTLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTY 309
            ::.|||||.|:..:..||.|.: |.:..|.|||.||..|.:|::|.....   |::|.  |.|  
Zfish   258 AFFNLTLKDVLFWEWFSRRCPH-ARFIFKGDDDVFVRTPAVLDYLQAVEA---NESLS--DES-- 314

  Fly   310 LVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRL 374
                     |.....:.|....|..|:...::|:::|...:| ..||.|..|.|.:.|..:..||
Zfish   315 ---------KNMESFVIGDVIHNAAPIRTNNTKYFIPESFFK-GLYPSYPGGGGVVYSGSLAHRL 369

  Fly   375 FEASLNTTLVYLEDVYITGLCAQKAKINRHHHPLF-SF----AHSKQMCAFKGTITQHQLKDDSM 434
            .|.|....|..::|||: |:|.::..:...|||.| :|    ...|:.||....:..|:.....|
Zfish   370 LEVSQRVHLFPIDDVYL-GMCLRRLGVYPVHHPAFLTFDFPKDEPKEPCANHTILLVHKRSPAEM 433

  Fly   435 VSAWNYVSNYSIKCPPPGRYFSQVRLRKRP 464
            ...|     :....|.|....:.:|::.||
Zfish   434 FKLW-----FETLIPSPECRNATLRVKPRP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 62/202 (31%)
si:dkey-160o24.3XP_021336785.1 Galactosyl_T 199..401 CDD:328824 73/257 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592627
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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