DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and b3galnt2

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001018523.1 Gene:b3galnt2 / 553716 ZFINID:ZDB-GENE-050522-358 Length:491 Species:Danio rerio


Alignment Length:385 Identity:76/385 - (19%)
Similarity:131/385 - (34%) Gaps:128/385 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIEEQSSLLAAEYSS-SSGAAASGSEDETVTTSGALRSKAKLRKRQLRNRMPLPRMLRRLGCYTL 72
            :::::.::::|.:|| |.|.||.|                                         
Zfish   174 QVDQEEAVISARFSSVSPGTAADG----------------------------------------- 197

  Fly    73 SAFLICGLLLVYLPLVYLDVHKRSAGLPDWTSETSRSIADYLDIGLSSGVIVPKDFCRNKTFLVI 137
                     :.|.|:....:.|...|...|.:|.|.::...                 |.:.|.:
Zfish   198 ---------MFYKPVEQFILPKGFEGTLLWEAEDSTALMSV-----------------NTSALRL 236

  Fly   138 AVCTGVDNFIQRHTIRE-TWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLT 201
            ....||.:|   .:|.| |..:.....:|.       |.|.:...:.| :::..:.|.|..    
Zfish   237 NNGGGVLHF---RSIEEGTLPHRNALGFPG-------LAGGFTFTVYD-VEVLSEMLRGRS---- 286

  Fly   202 ASVRIVFIVGRQK-DEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALK-HISRSC 264
                     |||| .||.|..|. ..:..||.::.|::..:.|.:|.|:..|.:...| .:..:.
Zfish   287 ---------GRQKIREAQLKGED-EALQEESLRHGDMVFVDVVGTYRNVPSKLLQFYKWSVENAD 341

  Fly   265 FNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQ 329
            |:   ..||.|||.|:::                        ...|:...:.||..:|  |:...
Zfish   342 FS---LLLKTDDDCFIDV------------------------DAVLMKMQRRRLTHTS--LWWGN 377

  Fly   330 FCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDV 389
            |.....|..| .||  ....|...:||.:..|:||::|.|:||.|...:.:......|||
Zfish   378 FRQNWAVDRV-GKW--QELEYASPAYPAFACGSGYVVSRDLVQWLASNAQHLKAYQGEDV 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 47/188 (25%)
b3galnt2NP_001018523.1 Galactosyl_T 300..444 CDD:304462 39/168 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.