DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and b3gnt3.1

DIOPT Version :10

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001009903.2 Gene:b3gnt3.1 / 494166 ZFINID:ZDB-GENE-040625-129 Length:390 Species:Danio rerio


Alignment Length:438 Identity:106/438 - (24%)
Similarity:181/438 - (41%) Gaps:134/438 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KAKLRKRQLRNRMPLPRML----RRLGCY-TLSAFLICGL---------LLVY-----LPLVYLD 91
            |.:..:..|.|....||..    ....|| .:||:.:...         .|:|     .|:: ||
Zfish    35 KCRRIEEMLHNLTNFPRTQTPEPSSAPCYPNMSAYKLPEFSTLQDHIKDFLLYRHCKSFPMI-LD 98

  Fly    92 VHKRSAGLPDWTSETSRSIADYLDIGLSSGVIVPKDFCRNKTFLVIAVCTGVDNFIQRHTIRETW 156
            ||.:..|        :::.||                    .||::.:.:..:|:.:|..:|:||
Zfish    99 VHDKCGG--------AQNSAD--------------------VFLLLVIKSSPENYDRREVLRKTW 135

  Fly   157 GNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGN 221
                     |..:||   ||.:                         :|.|||:|..:.    |.
Zfish   136 ---------AEERLH---KGVW-------------------------IRRVFIIGTSRS----GF 159

  Fly   222 E--TLNR-IHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIP 283
            |  .||| :.:|:.:..||:|.:|.||:.|||||.::.|:.:.|.|.| |.:.|..|||.|.|..
Zfish   160 EKHRLNRLLKLENNENKDILQWDFNDSFFNLTLKQILFLQWMDRRCPN-ARFLLDGDDDIFANTF 223

  Fly   284 NLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSY 348
            |::.:|.|         .:.:|.|.:|.|              ||....|.|:.::|||:|:|..
Zfish   224 NMIEYLQG---------QEDNDGSRHLFT--------------GHLLQKVKPIRKLSSKYYVPVQ 265

  Fly   349 MYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQKAKINRHHHPLFSF-- 411
            :::...||.|..|.|:|:|....:.:::.|.:..|:.::|||: |:|.:||.:    .|.|.|  
Zfish   266 IHESNRYPPYCGGGGFLLSGFTARTIYKMSHSIILLPIDDVYM-GMCLEKAGL----QPTFHFGV 325

  Fly   412 -----------AHSKQMCAFKGTITQHQLKDDSMVSAWNYVSNYSIKC 448
                       |.....|.::..:..|:.:...:...||.:.|..::|
Zfish   326 RTFGMNVPIKNADKLDPCYYREILVVHRFQPHMIFVMWNEIQNPDLQC 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:473923 65/205 (32%)
b3gnt3.1NP_001009903.2 Galactosyl_T 126..320 CDD:473923 74/263 (28%)

Return to query results.
Submit another query.