DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and b3gnt5

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_989240.1 Gene:b3gnt5 / 394849 XenbaseID:XB-GENE-955708 Length:377 Species:Xenopus tropicalis


Alignment Length:410 Identity:107/410 - (26%)
Similarity:191/410 - (46%) Gaps:98/410 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RMLRRLGCYTL--SAFLICGLLLVYLPLVYLDVHKRSAGLPDWTSETSRSIADYLDIGLSSGVIV 124
            |.|||...:.|  |.|:        |.|:.|.|.:.::.:....|.:.|.:.:..|. ::..:.|
 Frog     6 RRLRRCQFFQLLTSCFV--------LSLMALLVQEDNSLINHVKSYSYRYLINSYDF-VNDSLSV 61

  Fly   125 P----------------KDFCRNK-TFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHG 172
            |                :|.|:|: ..|::.|.|..:|..:|:.||:||||.             
 Frog    62 PRDRPDGAPSYRYLINNRDKCQNEDVLLLLFVKTSPENRRRRNAIRKTWGNE------------- 113

  Fly   173 HLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDI 237
                              ||:..:   ..|::::||.:|.:.| .:..::|...:.||::::||:
 Frog   114 ------------------DYIRSQ---YAANIKVVFALGIEAD-PVKSHQTQKDLVIENKRFNDL 156

  Fly   238 IQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLD 302
            ||::|.|:::|||||.::....::..| .:|.:.:..|||.||:.|||:::|  .::|:      
 Frog   157 IQQDFKDTFHNLTLKLLLQFGWVNSYC-PSAKFIMSADDDIFVHTPNLVSYL--KSLPI------ 212

  Fly   303 YHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMS 367
                             .:.|...|.......|:...:||:|:|..||...|||.|.:||.|::|
 Frog   213 -----------------ETQDFWIGRVHRGSPPIRSKTSKYYVPYEMYPWSSYPDYTAGAAYVVS 260

  Fly   368 IDVVQRLFEAS--LNTTLVYLEDVYITGLCAQKAKINRHHHPLFSFAHSK---QMCAFKGTITQH 427
            .||..:::|||  |||:| |::||:: |:||.|..:...:|..|: ...|   ..|.:...||.|
 Frog   261 KDVAAKVYEASQTLNTSL-YIDDVFM-GICANKMGVVPQYHVYFA-GEGKAPYHPCIYNKMITSH 322

  Fly   428 QLKDDSMVSAWNYVSNYSIK 447
            ...|| :...|...::.::|
 Frog   323 GHLDD-LDYLWRQATDPNVK 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 63/204 (31%)
b3gnt5NP_989240.1 Galactosyl_T 101..297 CDD:389837 73/258 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.