DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and B3gnt8

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001100962.1 Gene:B3gnt8 / 308440 RGDID:1305374 Length:389 Species:Rattus norvegicus


Alignment Length:447 Identity:99/447 - (22%)
Similarity:168/447 - (37%) Gaps:127/447 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SKAKLRKRQLRNRMPLP-----------RMLRRLG-CYTLSAFLICGLLLVYLPLVYLDVHKRSA 97
            |::.|:|.:.|..:|.|           .:..||| ...||:             .|.:..:|..
  Rat    27 SESWLKKAEPRGALPSPTPPSAEPTLPTNLSARLGQTGPLSS-------------AYWNQQQRQL 78

  Fly    98 G-LPD-----WTSETSRSIADYL------------------DIGLSSGVIVPKDFCRNK--TFLV 136
            | ||.     |.|..:..|.|::                  .:.|.:|...|...|.:|  .:|:
  Rat    79 GVLPSSDCQTWGSVAASEILDFILYPQDLRRFLLSAACRSFPLWLPAGEGSPVASCSDKDVPYLL 143

  Fly   137 IAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLT 201
            :||.:...:|..|..:|||||                                         |..
  Rat   144 LAVKSEPGHFAARQAVRETWG-----------------------------------------SPV 167

  Fly   202 ASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFN 266
            |..|::|::|  ....|.|.:..:.:..||.:|.|::..:|:|...|.|||.::.|..:|..|..
  Rat   168 AGTRLLFLLG--SPLGMGGPDLTSLVTWESRRYGDLLLWDFLDVPYNRTLKDLLLLTWLSHHCPK 230

  Fly   267 TAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLY-GHQF 330
            .: :.|:..|:.||:||.||.                     :|...|.|..::    || |..|
  Rat   231 VS-FVLQVQDNAFVHIPALLE---------------------HLQALPPTWARS----LYLGEVF 269

  Fly   331 CNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLC 395
            ....|:.:....:|:|...::.: ||.|.||.||::|..:...|.:|:........:||| ||.|
  Rat   270 TQAKPLRKPGGPFYVPKTFFEGD-YPAYASGGGYVISGRLAPWLLQAAARVAPFPFDDVY-TGFC 332

  Fly   396 AQKAKINRHHHPLFSFA----HSKQMCAFKGTITQHQLKDDSMVSAWNYVSNYSIKC 448
            .:...:....||.|..|    .::..||.:|.:..|.:.....:..|.::....::|
  Rat   333 FRALGLAPRAHPGFLTAWPAERTRDPCAVRGLLLVHPVSPQDTIWLWRHLWVPELRC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 52/203 (26%)
B3gnt8NP_001100962.1 Galactosyl_T 154..341 CDD:419759 60/257 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D174158at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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