DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and B3gnt6

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001099681.1 Gene:B3gnt6 / 292325 RGDID:1310926 Length:392 Species:Rattus norvegicus


Alignment Length:439 Identity:104/439 - (23%)
Similarity:173/439 - (39%) Gaps:115/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 MPLPRMLRRLGCYTLSAFLICGLLLVYLP--LVYLDVHKRSAG--LPDWTSE------------- 105
            |.||...|.....|| |||:.|:..|.|.  |:...:.:::.|  :..|:||             
  Rat     1 MALPCSRRSKTPKTL-AFLLVGMTFVVLNQWLLQEPMREKANGSVVTPWSSEAAVLRLPLLPAPP 64

  Fly   106 -TSRSIADYLDIGLSSGVIVPKDFCRNK--------------------TFLVIAVCTGVDNFIQR 149
             .:....|.|| |........:||.|.:                    .||::||.:...::.:|
  Rat    65 CAANVSVDLLD-GFQELPARIQDFLRYRHCRRFPQLWDAPHKCVGPRGVFLLLAVKSSPAHYERR 128

  Fly   150 HTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQK 214
            ..||.|||....::                                 ||    .||.:|:||...
  Rat   129 ELIRRTWGQERSYS---------------------------------GQ----QVRRLFLVGTSS 156

  Fly   215 -DEAMLGNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFLKCDDDT 278
             :||....:..:.:.:|:.::.|::|.:|.|::.|||||.:..|......|...: :.|.||||.
  Rat   157 PEEAAREPQLADLLSLEAREHGDVLQWDFKDTFLNLTLKHLHLLDWTEEHCPGMS-FLLSCDDDV 220

  Fly   279 FVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKW 343
            ||:..|:|.||                    .|.:|:..|      ..|......||:.|..||:
  Rat   221 FVHTANVLRFL--------------------EVQSPERHL------FTGQLMAGSVPIRESWSKY 259

  Fly   344 YMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQKAKI-NRHHHP 407
            ::|..::...:||.|.||.|:|||....|.|..||.:..|..::|.|: |:|.|:|.: ..:|..
  Rat   260 FVPRQLFPGTAYPVYCSGGGFLMSRRTAQDLRRASHHVPLFPIDDAYM-GMCLQQAGLAPSNHEG 323

  Fly   408 LFSFA--------HSKQMCAFKGTITQHQLKDDSMVSAWNYVSNYSIKC 448
            :..|.        .|...|.::..:..|:.....|:..|..:.:.:::|
  Rat   324 IRPFGVQLPGTKRSSFDPCMYRELLLVHRFAPYEMLLMWKALHDPALQC 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 61/204 (30%)
B3gnt6NP_001099681.1 Galactosyl_T 126..320 CDD:304462 68/258 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350936
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm12332
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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