DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and B3gnt4

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001099408.1 Gene:B3gnt4 / 288752 RGDID:1309612 Length:349 Species:Rattus norvegicus


Alignment Length:421 Identity:104/421 - (24%)
Similarity:174/421 - (41%) Gaps:112/421 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 MLRRLGCYTLSAFLICGLLLVYLP-LVYL---------DVHK---------RSAGLPDWT-SETS 107
            |||||||     .|.|.|:::.|. |::|         :.|:         .|...|:.| ..||
  Rat     1 MLRRLGC-----VLFCTLVVLLLGCLLFLKERTPAGSSEAHQHFLAPPRPHHSQCSPNLTVVNTS 60

  Fly   108 RSIADYLDIGLS-------SGVIVPKDFCRNKTFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYP 165
            .|:.....:.|:       |.::.|.: |....||::.:.:...:..||..||.|||        
  Rat    61 LSLPSRHRLFLTYRHCRNFSILLEPSE-CARDIFLLLVIKSQPAHIEQRAAIRSTWG-------- 116

  Fly   166 AFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIVFIVG--RQKDEAMLGNETLNRIH 228
                     :|             |.:..|.      .:::||::|  .....|.|       :.
  Rat   117 ---------RG-------------GSWARGR------QLKLVFLLGVAGPVPPAQL-------LA 146

  Fly   229 IESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGT 293
            .||.:::||:|.:|.:.:.|||||.:...:.|:.:| ..|.:.||.|||.|:::||:|.||.|  
  Rat   147 YESWQFDDILQWDFAEDFFNLTLKELHVQRWIAAAC-TQAHFILKGDDDVFIHVPNVLEFLEG-- 208

  Fly   294 IPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKY 358
                                    ...:.|:|.|.......|......|:::|..||:...||.|
  Rat   209 ------------------------WDPAQDLLVGDVIRLARPNRNTKVKYFIPFSMYRARHYPPY 249

  Fly   359 LSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQKAKINRHHHPLF-SFA-----HSKQM 417
            ..|.||:||...|:.|..|.....|..::||:: |:|.:|..:...||..| :|.     :.:..
  Rat   250 AGGGGYVMSQATVRHLHTAMEEAELFPIDDVFV-GMCLRKLGVTPIHHAGFKTFGIQQPLNPRDP 313

  Fly   418 CAFKGTITQHQLKDDSMVSAWNYVSNYSIKC 448
            |.::|.:..|:|....|.:.|..|::..::|
  Rat   314 CLYRGLLLVHRLSPLEMWTMWALVTDERLEC 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 57/204 (28%)
B3gnt4NP_001099408.1 Galactosyl_T 106..295 CDD:419759 66/259 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81939
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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