DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and bre-5

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001255612.1 Gene:bre-5 / 178142 WormBaseID:WBGene00000270 Length:322 Species:Caenorhabditis elegans


Alignment Length:391 Identity:87/391 - (22%)
Similarity:142/391 - (36%) Gaps:102/391 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RMLRRLGCYTLSAF--LICGLLLVYLPLVYLDVHK-RSAGLPD--WTSETSR-----SIADYLDI 116
            |:|:| ..:.||:|  |:...:.::|..|...|.| |.....|  |..||..     ....|...
 Worm     6 RILKR-KYHELSSFQKLLIFTITIFLLWVLGVVDKFRETSFGDFSWPLETRNLQLRSKFTKYPQC 69

  Fly   117 GLSSGVIVPKDFCRNKTFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPP 181
            ..|.         ..:..::|.:.:...|...|.::|:|||        .|..:.|         
 Worm    70 KFSG---------NGQKIIIIIIKSSAKNGPMRESVRKTWG--------VFRMIDG--------- 108

  Fly   182 LPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETLNRIHIESEKYNDIIQENFVDSY 246
                                ..|..:|||||.::     .|.:.||.:|||||.||:..:.:|||
 Worm   109 --------------------VEVMPIFIVGRVEN-----MEIMRRIDVESEKYKDILAISDIDSY 148

  Fly   247 NNLTLKSVMALKHIS--RSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTY 309
            .|.|||...|:.:.:  ..|.:....|| .|||..|:||||:.|                     
 Worm   149 RNNTLKLFGAIDYAANPNQCSSPDFTFL-VDDDYLVHIPNLVKF--------------------- 191

  Fly   310 LVTAPQTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRL 374
                  .:.|...:::|.....:..|......|..:....|....||.|:|.....::.:.:.| 
 Worm   192 ------AKTKQKEELVYEGFVFDTSPFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTSETIAR- 249

  Fly   375 FEASLNTTLVYLEDVYITGLCAQKAKINRHHHPLFSFAHSKQMCAFKGTITQHQLKDDSMVSAWN 439
            |..|:....::..|...||:.|:...:...|:..|.|     .|.   .::|.:. ||.:::...
 Worm   250 FRNSIRKLKMFPFDDVFTGILAKTVNVAATHNENFIF-----WCR---RVSQKEW-DDGVIAVHG 305

  Fly   440 Y 440
            |
 Worm   306 Y 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 53/204 (26%)
bre-5NP_001255612.1 Galactosyl_T 93..282 CDD:304462 60/259 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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