DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and b3gnt9

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:XP_002937219.2 Gene:b3gnt9 / 100495067 XenbaseID:XB-GENE-6044833 Length:414 Species:Xenopus tropicalis


Alignment Length:465 Identity:112/465 - (24%)
Similarity:173/465 - (37%) Gaps:145/465 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CYTLSAFLICGLL-----------------------LVYLPLVYLDVHKRSAGLPDWTSETSRS- 109
            |..|...::|.||                       |:.:...|||  |::.|..|......:: 
 Frog    11 CTLLLVIVLCTLLYSLMRPTNKQETAYYKKSKESKSLIKIGKSYLD--KQTKGYVDKPKSMGKAK 73

  Fly   110 -IADYLDI-------GLSSGVIVP----------KDF------------CRNKT---FLVIAVCT 141
             ::|...:       .:||....|          |||            |:..|   ||:|||.:
 Frog    74 LLSDDYKVSNKEPKASISSPTTEPPFDFQLYLRSKDFRNFSLMINQPNKCKRSTMDPFLLIAVKS 138

  Fly   142 GVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRI 206
            .|:.|.:|.::|:|||.                                     ||......|:.
 Frog   139 IVEEFDRRESVRKTWGR-------------------------------------EGMISGVRVQR 166

  Fly   207 VFIVGRQKDEAMLGN-ETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVY 270
            ||::|..|::..:.. |:|  :|.||..|.||:..:|||::.|||||.:..|......|.|....
 Frog   167 VFLLGTPKNKTAVSMWESL--MHQESHYYKDILLWDFVDTFFNLTLKEIHFLSWAEEFCGNVKFI 229

  Fly   271 FLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTRLKASSDVLYGHQFCNVVP 335
            | |.|.|.|||:.||:|:|                          ....||.|:..|.......|
 Frog   230 F-KGDADVFVNVENLINYL--------------------------QNQNASEDLFVGDIINQARP 267

  Fly   336 VSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQKAK 400
            :....||:|:|..||....||.|..|.|:|||...:::|..|.....|..::||:: |:|.|:..
 Frog   268 IRSKKSKYYIPETMYGLGLYPPYAGGGGFLMSGITMKKLSHACQEVELFPIDDVFL-GMCLQRIN 331

  Fly   401 INRHHHPLF-SFAHSK----------QMCAFKGTITQHQLKDDSMVSAWNYVSNYSIKCPPPGRY 454
            :....|..| :|..:|          ..|.::..:..|.||...:...||.:....:.|      
 Frog   332 LKPVMHEGFKTFGITKPSAAPHMETFNPCFYRDLMVVHSLKPAEIWLMWNLLHGQQLPC------ 390

  Fly   455 FSQVRLRKRP 464
             ||.:..|:|
 Frog   391 -SQKQRIKKP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 62/203 (31%)
b3gnt9XP_002937219.2 Galactosyl_T 144..335 CDD:419759 69/257 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 143 1.000 Inparanoid score I4358
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.