DRSC/TRiP Functional Genomics Resources

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Protein Alignment GalT1 and LOC100333524

DIOPT Version :9

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:XP_002666355.2 Gene:LOC100333524 / 100333524 -ID:- Length:309 Species:Danio rerio


Alignment Length:405 Identity:98/405 - (24%)
Similarity:169/405 - (41%) Gaps:123/405 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CYT---LSAFLICGLLLVYLPLVYLDVHKRSAGLPDWTSETSRSIADYLDIGLSSGVIVPKDF-- 128
            |.|   :|.|::..:||::.....|:..|       |               |...|::|:::  
Zfish     3 CKTWLLVSLFILLNILLLFFTARTLERQK-------W---------------LKLNVVIPQNYKF 45

  Fly   129 -------C-RNKTFLVIAVCTGVDNFIQRHTIRETWGNTTEFNYPAFGKLHGHLKGHYLPPLPDR 185
                   | :.:.|:||.|....:|...|:.||.||||                           
Zfish    46 ILDLPEKCQQQEPFVVIIVPVAPENIEARNAIRTTWGN--------------------------- 83

  Fly   186 LKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAMLGNETL-NRIHIESEKYNDIIQENFVDSYNNL 249
                      ||......|.::|::|.:.     ||||| .::..||:::.|::|.:|.|:|.||
Zfish    84 ----------EGLVRDKIVLVLFLLGSRS-----GNETLQEQLQNESQQHGDLLQSSFQDTYRNL 133

  Fly   250 TLKSVMALKHISRSCFNTAVYFLKCDDDTFVNIPNLLNFLLGGTIPLYNDTLDYHDRSTYLVTAP 314
            |:|:::.::.:||.| ..|.|..|.|.|..:|:.|||..|:         :|:..:|: |:    
Zfish   134 TVKTLVMMEWLSRKC-PQASYAAKVDADVLLNVKNLLYMLV---------SLNTLERN-YI---- 183

  Fly   315 QTRLKASSDVLYGHQFCNVVPVSEVSSKWYMPSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASL 379
             |.|..|.:        ||  :.:.:||:|:|..:|....||.|..|..|:.|:|:.:::...|.
Zfish   184 -TGLVLSVN--------NV--MRDPTSKFYIPHDVYPRSRYPPYPQGMCYIFSMDLPEKILHISR 237

  Fly   380 NTTLVYLEDVYITGLCAQK-----AKIN------RHHHPLFSFAHSKQMCAFKGTITQHQLKDDS 433
            ....:::||.|| |:|.::     .|:|      |....|..|.:|       |.|.........
Zfish   238 FVRPIFIEDAYI-GMCLRRLGIRPEKLNFGQFLIRPPEHLDRFYYS-------GLIAILTQSPSQ 294

  Fly   434 MVSAWNYVSNYSIKC 448
            ::|.|..|.:.:..|
Zfish   295 LISYWMDVQSSNKLC 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:304462 62/214 (29%)
LOC100333524XP_002666355.2 Galactosyl_T 72..263 CDD:304462 68/259 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24800
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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