DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GalT1 and si:dkey-175m17.6

DIOPT Version :10

Sequence 1:NP_788328.1 Gene:GalT1 / 36279 FlyBaseID:FBgn0053145 Length:466 Species:Drosophila melanogaster
Sequence 2:XP_005161436.2 Gene:si:dkey-175m17.6 / 100007286 ZFINID:ZDB-GENE-091204-392 Length:441 Species:Danio rerio


Alignment Length:500 Identity:118/500 - (23%)
Similarity:193/500 - (38%) Gaps:155/500 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SSLLAAEYSS----------SSGAAASGSEDETVTTSGALRS-------KAKLRKRQLRNRM--- 58
            |..:|..||.          ::||:|:         ||||.|       ..:|....|.||:   
Zfish    31 SVFVAVSYSPPVPQLPLHFIATGASAN---------SGALASHPVRPFWNLRLEDGALWNRLQHI 86

  Fly    59 ------PLPR------------------MLRRLGCYTLSAFLICGLLLVYLPLVYLDVHKRSAGL 99
                  |:.|                  |::...|....|:                    ::.|
Zfish    87 WDREHNPILRGNSTRSTSQSLDADQPQEMIKSHACEQDKAW--------------------ASHL 131

  Fly   100 PDWTSETSRSIADYLDIGLSS-----GVIVPK-DFCRNK----TFLVIAVCTGVDNFIQRHTIRE 154
            ||:.: ....:.|::   ||.     .::|.: |.|..:    .||::|:.:.:.||..|..|||
Zfish   132 PDFNT-LPNQMKDFV---LSMHCRHYAILVDQPDLCAGQDSETPFLLMAIKSQIGNFENRQAIRE 192

  Fly   155 TWGNTTEFNYPAFGKLHGHLKGHYLPPLPDRLKMYGDYLSGEGQSLTASVRIVFIVGRQKDEAML 219
            |||.:                    .|:.:         .|.|:...  ||.||::.||..|...
Zfish   193 TWGKS--------------------GPIQE---------GGGGRGWL--VRTVFLLARQDTETGP 226

  Fly   220 GNETLNRIHIESEKYNDIIQENFVDSYNNLTLKSVMALKHISRSCFNTAVYFL-KCDDDTFVNIP 283
            ..:....:.:||..:.||:..:|.||:.|||||.|:....:|:.|  ..|:|: |.|||.||...
Zfish   227 HPDLNALLKLESSTHKDILLWDFKDSFFNLTLKDVLFWNWLSKHC--PQVHFIFKGDDDVFVRTK 289

  Fly   284 NLLNFLLGGTIPLYNDTLDYHDRSTYLVTAPQTR---LKASSDVLYGHQFCNVVPVSEVSSKWYM 345
            .|               |||.|:    :...:||   .|...|.:.|....|..|..:.::|:|:
Zfish   290 AL---------------LDYLDQ----IRVEKTRGNKTKGLVDFVVGDVIANAWPNRQPNTKYYI 335

  Fly   346 PSYMYKPESYPKYLSGAGYLMSIDVVQRLFEASLNTTLVYLEDVYITGLCAQKAKINRHHHPLF- 409
            |...|| .:||.|..|.|.:.|..:..||.|.|...:|..::||:: |:|..:..:...||..| 
Zfish   336 PESFYK-GTYPTYPGGGGVVYSGALAMRLQEVSRWVSLFPIDDVFL-GMCLHRLGVPPTHHSGFL 398

  Fly   410 SFAHSKQM----CAFKGTITQHQLKDDSMVSAWNYVSNYSIKCPP 450
            :|...:.:    ||:...:..|:.....|::.|.     .::.||
Zfish   399 TFDLPEDVRDKPCAYHNVLLVHRRTPKEMLTLWK-----ELQVPP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalT1NP_788328.1 Galactosyl_T 204..407 CDD:473923 63/206 (31%)
si:dkey-175m17.6XP_005161436.2 None

Return to query results.
Submit another query.