DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment reb and C34E11.2

DIOPT Version :10

Sequence 1:NP_610713.2 Gene:reb / 36275 FlyBaseID:FBgn0033667 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001360677.1 Gene:C34E11.2 / 181359 WormBaseID:WBGene00007935 Length:805 Species:Caenorhabditis elegans


Alignment Length:477 Identity:131/477 - (27%)
Similarity:216/477 - (45%) Gaps:73/477 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRRKI---ISRSLDNLDAIGQEEQEEDVWHDREKLFRDHINEVLSKWEQ--IDDEIWAKIIVFEK 62
            |:|::   :|||  :|....|.....|.|:|.:....|.:.|||:|..:  ||||||.||::.|:
 Worm    30 SKREMENGVSRS--SLVHGTQTNPNSDTWYDTDAFLLDQVKEVLNKLNEGSIDDEIWGKIVIMER 92

  Fly    63 NRRVAKAYARSSVITINGSKNGFDGVRIGLNGFDNPMRDAETKVIKKSIGDGFKIKMDDTGNIFI 127
            .:||||||.|.:.:.|:||::.|||..:|.|.|:||.||..||.|:..|.||..:|||..|||..
 Worm    93 CKRVAKAYLRKTTVIIDGSEDEFDGKTLGFNHFENPTRDDHTKEIRAKIADGVILKMDYQGNIKG 157

  Fly   128 KRYGKSSIYVNSTSQGNEE---TVIGGDII----QMPQMSLTAATSARLFDMKKFQTNINREFAR 185
            ...|.:.|    ..||.:|   ..|...::    ::...::....:.::|||:||:.::.||...
 Worm   158 MARGATPI----VCQGWKEPRNNCISDRLVRLHGKLNHGAMEDEKAYKVFDMRKFKHSLERELHD 218

  Fly   186 TYPE-RGRLERQCLSAVSLVKSNNNLINSPVWILVVNVVAMDMLRSRLQTIPKSLDAMGM----- 244
            ..|: |..|.:.|: .|:|||...::..:|.|..:||:||:||::.::..|...|:..|:     
 Worm   219 GTPDARNLLLKTCM-RVALVKDGADMNRTPCWFAIVNLVALDMIKEKIPLIKSLLNVYGLPSVTS 282

  Fly   245 RVPLTNSSEDPY---------STIESQVGLIYPTPAASDDSQN----------SQHSSNSSKGRR 290
            ..|::......:         :...:|.....|||..::::.|          :|.:|..|..:.
 Worm   283 PSPMSGPDNSGFNAQTLTQIIAAAVTQANKGTPTPTRNNNNNNQNLTISPEQLAQIASTISIAQT 347

  Fly   291 SIFSAAFLNEGPYVPKPDYESGGSLTPIYADKKRQKSSGS---QQRKKQDDPYYCGLLARIPNFI 352
            :....|.|.:.....||.:.|..||.....|...::|..|   :.|.|:.:.     :.:|....
 Worm   348 NTLRTADLVKKERPKKPYHCSTSSLDSSGEDSSGRRSEASTAIKSRAKRWEQ-----VQKINEIE 407

  Fly   353 KSSKQPCPGGASKPKKEPKISRKISAQHQQQQFLQPAQPIPIATFHHS----YFPYKLYPPQHRL 413
            |.::.|......||:...:..|.:         ||..    |.|..||    |...|.:......
 Worm   408 KYTESPAVQMLDKPRAGGRAHRPL---------LQDV----IFTRSHSITSDYDSNKEHFDSGSW 459

  Fly   414 SQSQMSLWDAR----SLISAHE 431
            |.:|....|.|    |::|.||
 Worm   460 SSTQSRYKDGRSTSSSVVSEHE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rebNP_610713.2 DWB 53..220 CDD:197770 60/174 (34%)
C34E11.2NP_001360677.1 DWB 83..253 CDD:197770 60/174 (34%)

Return to query results.
Submit another query.