Sequence 1: | XP_006240148.1 | Gene: | Hectd1 / 362736 | RGDID: | 1561653 | Length: | 2610 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368365.1 | Gene: | hecd-1 / 177486 | WormBaseID: | WBGene00016405 | Length: | 2650 | Species: | Caenorhabditis elegans |
Alignment Length: | 2933 | Identity: | 1093/2933 - (37%) |
---|---|---|---|
Similarity: | 1518/2933 - (51%) | Gaps: | 606/2933 - (20%) |
- Green bases have known domain annotations that are detailed below.
Rat 1 MADVDPDTLLEWLQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKIFLDES 65
Rat 66 APDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNRTSRDLAEQCVKVLELI 130
Rat 131 CTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQDSSLEICVESLSSLL 195
Rat 196 KHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKH-GLTEELLSRMAAAGGTVSGPSSACKPGRS 259
Rat 260 TTGAPSAAADSKLSNQVSTIVSLLSTLCRGSPLVTHDLLRSELPDSI----ESALQGDERCVLDT 320
Rat 321 MRLVDLLLVLLFEGRKALPKSSAGSTGRIPGLRRLDSSGERSHRQLIDCIRSKDTDALIDAIDTG 385
Rat 386 AFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRSSSLHYAACFGRPQVAKTLLRHG 450
Rat 451 ANPDLRDEDGKTPLDKARERG---HSEVVAILQSPGDWMCPVNKGDDKKKKDTNKDEEECNEPK- 511
Rat 512 GDPEMAPVYLKRLLPVFAQTFQHTMLPSIRKASLALIRKMIHFCSEALLKEVCDSDA-----GHN 571
Rat 572 LPT-------ALVEITATVLDQEDDDDGHLLALQIIRDLVDKGGDIFLDQLARLGVISKVSALAG 629
Rat 630 -------------------------------------------------PSSDDENEEESK---- 641
Rat 642 ------PEKE----------DEPQEDAKE----------------------------------LQ 656
Rat 657 QGKPYHWRDWSVIRGRDCLYIWSDAAALELSNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESR 721
Rat 722 SEFLEKLQR---------ARGQVKPSTSSQPI--LSAPG-----PTKLTVGNWSLTCLKEGEIAI 770
Rat 771 HN-----SDGQQATIL-----KEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWT--GKRGRKLK 823
Rat 824 SKLEKTKQKVRTMARDLYDDHFKAVESMPRGVVVTLRNIATQLESSWELHTNRQC---------- 878
Rat 879 -IEGENTWRDLMKTALENLIVLLKDESTISPYEMCSSGLVQALLTVLNSSIDLDMKQDCSQLVER 942
Rat 943 I------NVFKTAFSESEDDESRPAVA-LIRKLIAVLESIERLPLHLYDTP-GSTYNLQILTRRL 999
Rat 1000 RFRLERAP-------GETALIDRTGRMLKMEPLATVESLEQYLLKMVAKQWYDFDRSSFVFVRKL 1057
Rat 1058 RE----GQNFIFRHQHDFDENGIIYWIGTNAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDIL 1118
Rat 1119 SRDNSALNCHSNDDKNAWFAIDLGVWVIPSAYTLRHARGYGRSALRNWVFQVSKDGQNWTSLYTH 1183
Rat 1184 VDDCSLNEPGSTATWPLDPAKDEK--QGWRHVRLKQMGKNASGQTHYLSLSGFELYGTV-----N 1241
Rat 1242 GVCED------QLGKAAKEAEANLRRQRRLVRSQVLKYMVPG----------------------- 1277
Rat 1278 --------------ARVIRGLDWKWRDQDGSPQGEGTVTGELHNGWIDVTWDAGGSNSYRMGAEG 1328
Rat 1329 KFDLKLAPG----YDPDTVAS------------------PK----PVSSTVSGTTQSWSS----- 1362
Rat 1363 -------LVKNNCPDKTSAAAGSSS-----------------RKGSSSSVCS---VASSSDISLG 1400
Rat 1401 STKTERRSEIVMEHSIVSGADVHEPIVVLSSAENVPQTEVGSSSSASTSTLTAETGSENAERKLG 1465
Rat 1466 PDSSVRAPGESSAISMGIVSVSSPDVSSVSELTNKEAASQRPLSSSASNR-LSVSS--LLAAGAP 1527
Rat 1528 MSSSASVPNLSSRETSSLESFVRRVANIARTNATNNMNLSRSSSDNNTNTLGRNVMSTATSPLMG 1592
Rat 1593 AQS--FPNLTTPGTTSTVTMSTSSVTSSSNVATATTVLSVGQSLSNTLTTSLTSTSSESDTGQEA 1655
Rat 1656 EYSLYDFLDSCRASTLLAELDDDEDLPEPDEEDDENEDDNQEDQEYEEVMILRRP--SLQRRAGS 1718
Rat 1719 RSDVTHHAVTSQLPQVPSGAGSRPIGEQEEEEYETKGGRRRTWDDDYVLKRQFSALVPAFDPRPG 1783
Rat 1784 RTNVQQTTDLEIPPPGTPHSELLEEVECTPS--------PRLALTLKVTGLGTTREVELPLSNFR 1840
Rat 1841 STIFYYVQKLLQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDKEKENGKMGCWSIEHVEQYLGT 1905
Rat 1906 DELPKNDLITYLQKNADAAFLRHWKLTGTNKSIRKNRNCSQLIAAYKDFCEHGTRSGLNQGASSS 1970
Rat 1971 LQSSDILNLTKEQPQAKAGNGQNPCGVEDVLQLLRILYIVASDPYSRISQEDGDEQPQFTFPPDE 2035
Rat 2036 FTSKKITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFETRQLYFTCTAFGASRAIVWLQN 2100
Rat 2101 RREATVERTR------TTSSVRRDDP-GEFRVGRLKHERVKVPRG-ESLMEWAENVMQIHADRKS 2157
Rat 2158 VLEVEFLGEEGTGLGPTLEFYALVAAEFQRTDLGTWLCDDNFPDD-------ESRHVDLGGGLKP 2215
Rat 2216 PGYYVQRSCGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMC---MG 2277
Rat 2278 DIKSNMSKLIYESRGDRDLHCTESQSEASTEEGHDSLSVGSFEEDSKSEFILDPPKPKPPAWFNG 2342
Rat 2343 ILTWEDFELVNPHRARFLKEIKDLAIKRRQILGNKSLSEDEKNTKLQELVLKNPSGSGPPLSIED 2407
Rat 2408 LGLNFQFCPSSRIYGFTAVDLKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKV 2472
Rat 2473 FPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKA 2537
Rat 2538 FLQFTTGCSTLPPGGLANLHPRLTVVRKVDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAAT 2602
Rat 2603 MEKGFHLN 2610 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hectd1 | XP_006240148.1 | Ank_2 | 366..457 | CDD:289560 | 62/90 (69%) |
ANK repeat | 366..393 | CDD:293786 | 16/26 (62%) | ||
ANK | 369..479 | CDD:238125 | 75/112 (67%) | ||
ANK repeat | 396..426 | CDD:293786 | 19/29 (66%) | ||
ANK repeat | 428..457 | CDD:293786 | 23/28 (82%) | ||
F5_F8_type_C | 1107..1240 | CDD:304887 | 77/134 (57%) | ||
MIB_HERC2 | 1277..1335 | CDD:284184 | 29/94 (31%) | ||
HECTc | 2131..2608 | CDD:238033 | 242/487 (50%) | ||
HECTc | 2155..2607 | CDD:214523 | 228/461 (49%) | ||
hecd-1 | NP_001368365.1 | Ank_2 | 345..436 | CDD:403870 | 62/90 (69%) |
ANK repeat | 345..372 | CDD:293786 | 16/26 (62%) | ||
ANK repeat | 374..403 | CDD:293786 | 19/28 (68%) | ||
PTZ00322 | 383..>497 | CDD:140343 | 67/115 (58%) | ||
ANK repeat | 405..436 | CDD:293786 | 23/30 (77%) | ||
F5_F8_type_C | 1243..1365 | CDD:419973 | 72/125 (58%) | ||
MIB_HERC2 | 1452..1509 | CDD:399589 | 29/56 (52%) | ||
HECTc | 2221..2648 | CDD:238033 | 242/487 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C162952360 | |
Domainoid | 1 | 1.000 | 415 | 1.000 | Domainoid score | I350 |
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H9115 | |
Inparanoid | 1 | 1.050 | 1177 | 1.000 | Inparanoid score | I92 |
OMA | 1 | 1.010 | - | - | QHG52632 | |
OrthoDB | 1 | 1.010 | - | - | D10145at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006411 | |
OrthoInspector | 1 | 1.000 | - | - | oto28049 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107049 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45670 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4675 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.860 |