Sequence 1: | XP_006240148.1 | Gene: | Hectd1 / 362736 | RGDID: | 1561653 | Length: | 2610 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012823549.1 | Gene: | hectd1 / 100192372 | XenbaseID: | XB-GENE-1010869 | Length: | 2580 | Species: | Xenopus tropicalis |
Alignment Length: | 2646 | Identity: | 2315/2646 - (87%) |
---|---|---|---|
Similarity: | 2444/2646 - (92%) | Gaps: | 102/2646 - (3%) |
- Green bases have known domain annotations that are detailed below.
Rat 1 MADVDPDTLLEWLQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKIFLDES 65
Rat 66 APDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNRTSRDLAEQCVKVLELI 130
Rat 131 CTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQDSSLEICVESLSSLL 195
Rat 196 KHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRMAAAGGTVSGPSSACKPGRST 260
Rat 261 TGAPSAAADSKLSNQVSTIVSLLSTLCRGSPLVTHDLLRSELPDSIESALQGDERCVLDTMRLVD 325
Rat 326 LLLVLLFEGRKALPKSSAGSTGRIPGLRRLDSSGERSHRQLIDCIRSKDTDALIDAIDTGAFEVN 390
Rat 391 FMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRSSSLHYAACFGRPQVAKTLLRHGANPDL 455
Rat 456 RDEDGKTPLDKARERGHSEVVAILQSPGDWMCPVNKGDDKKKKDTNKDEEECNEPKGDPEMAPVY 520
Rat 521 LKRLLPVFAQTFQHTMLPSIRKASLALIRKMIHFCSEALLKEVCDSDAGHNLPTALVEITATVLD 585
Rat 586 QEDDDDGHLLALQIIRDLVDKGGDIFLDQLARLGVISKVSALAGPSSDDENEEESKPE------- 643
Rat 644 ----------------KEDEPQEDAKELQQGKPYHWRDWSVIRGRDCLYIWSDAAALELSNGSNG 692
Rat 693 WFRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQRARGQVKPSTSSQPILSAPGPTKLTVGN 757
Rat 758 WSLTCLKEGEIAIHNSDGQQATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKL 822
Rat 823 KSKLEKTKQKVRTMARDLYDDHFKAVESMPRGVVVTLRNIATQLESSWELHTNRQCIEGENTWRD 887
Rat 888 LMKTALENLIVLLKDESTISPYEMCSSGLVQALLTVLNSSIDLDMKQDCSQLVERINVFKTAFSE 952
Rat 953 SEDDESRPAVALIRKLIAVLESIERLPLHLYDTPGSTYNLQILTRRLRFRLERAPGETALIDRTG 1017
Rat 1018 RMLKMEPLATVESLEQYLLKMVAKQWYDFDRSSFVFVRKLREGQNFIFRHQHDFDENGIIYWIGT 1082
Rat 1083 NAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDNSALNCHSNDDKNAWFAIDLGVWVIP 1147
Rat 1148 SAYTLRHARGYGRSALRNWVFQVSKDGQNWTSLYTHVDDCSLNEPGSTATWPLDPAKDEKQGWRH 1212
Rat 1213 VRLKQMGKNASGQTHYLSLSGFELYGTVNGVCEDQLGKAAKEAEANLRRQRRLVRSQVLKYMVPG 1277
Rat 1278 ARVIRGLDWKWRDQDGSPQGEGTVTGELHNGWIDVTWDAGGSNSYRMGAEGKFDLKLAPGYDPDT 1342
Rat 1343 VASPKPVSSTVSGTTQSWSSLVKNNCPDK-----------TSAAAGSSSRKGSSSSVCSVASSSD 1396
Rat 1397 ISLGSTKTERRSEIVMEHSIVSGADV-HEPIVVLSSAENVPQTEVGSSSSASTSTLTAETGSENA 1460
Rat 1461 ERKLGPDSSVRAPGESSAISMGIVSVSSPDVSSVSELTNKEAASQRPLSSSASNRLSVSSLLAAG 1525
Rat 1526 APMSSSASVPNLSSRETSSLESFVRRVANIARTNATNNMNLSRSSSDNNTNTLGRNVMSTATSPL 1590
Rat 1591 MGAQSFPNLTTPGTTSTVTMSTSSVTSSSNVATATTVLSVGQSLSNTLTTSLTSTSSESDTGQEA 1655
Rat 1656 EYSLYDFLDSCRASTLLAELDDDEDLPEPDEEDDENEDDNQEDQEYEEVMILRRPSLQRRAGSRS 1720
Rat 1721 DVTHHAVTSQLPQVPSGAGSRPIGEQEEEEYETKGGRRRTWDDDYVLKRQFSALVPAFDPRPGRT 1785
Rat 1786 NVQQTTDLEIPPPGTPHSELLEEVECTPSPRLALTLKVTGLGTTREVELPLSNFRSTIFYYVQKL 1850
Rat 1851 LQLSCNGNVKSDKLRRIWEPTYTIMYREMKDSDKEKENGKMGCWSIEHVEQYLGTDELPKNDLIT 1915
Rat 1916 YLQKNADAAFLRHWKLTGTNKSIRKNRNCSQLIAAYKDFCEHGTRSGLNQGASSSLQSSDILNLT 1980
Rat 1981 KEQPQAKAGNGQNPCGVEDVLQLLRILYIVASDPYS-RISQEDGDEQPQFTFPPDEFTSKKITTK 2044
Rat 2045 ILQQIEEPLALASGALPDWCEQLTSKCPFLIPFETRQLYFTCTAFGASRAIVWLQNRREATVERT 2109
Rat 2110 RTTSSVRRDDPGEFRVGRLKHERVKVPRGESLMEWAENVMQIHADRKSVLEVEFLGEEGTGLGPT 2174
Rat 2175 LEFYALVAAEFQRTDLGTWLCDDNFPDDESRHVDLGGGLKPPGYYVQRSCGLFTAPFPQDSDELE 2239
Rat 2240 RITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMCMGDIKSNMSKLIYESRGDRDLHCTESQSE 2304
Rat 2305 ASTEEGHDSLSVGSFEEDSKSEFILDPPKPKPPAWFNGILTWEDFELVNPHRARFLKEIKDLAIK 2369
Rat 2370 RRQILGNKSLSEDEKNTKLQELVLKNPSGSGPPLSIEDLGLNFQFCPSSRIYGFTAVDLKPSGED 2434
Rat 2435 EMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWA 2499
Rat 2500 AEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVR 2564
Rat 2565 KVDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATMEKGFHLN 2610 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hectd1 | XP_006240148.1 | Ank_2 | 366..457 | CDD:289560 | 90/90 (100%) |
ANK repeat | 366..393 | CDD:293786 | 26/26 (100%) | ||
ANK | 369..479 | CDD:238125 | 109/109 (100%) | ||
ANK repeat | 396..426 | CDD:293786 | 29/29 (100%) | ||
ANK repeat | 428..457 | CDD:293786 | 28/28 (100%) | ||
F5_F8_type_C | 1107..1240 | CDD:304887 | 121/132 (92%) | ||
MIB_HERC2 | 1277..1335 | CDD:284184 | 54/57 (95%) | ||
HECTc | 2131..2608 | CDD:238033 | 429/476 (90%) | ||
HECTc | 2155..2607 | CDD:214523 | 404/451 (90%) | ||
hectd1 | XP_012823549.1 | Ank_2 | 366..457 | CDD:372319 | 90/90 (100%) |
ANK repeat | 366..393 | CDD:293786 | 26/26 (100%) | ||
PLN03192 | <386..612 | CDD:215625 | 215/225 (96%) | ||
ANK repeat | 396..426 | CDD:293786 | 29/29 (100%) | ||
ANK repeat | 428..457 | CDD:293786 | 28/28 (100%) | ||
F5_F8_type_C | 1130..1263 | CDD:390053 | 121/132 (92%) | ||
MIB_HERC2 | 1300..1358 | CDD:369043 | 54/57 (95%) | ||
BTHB | 1861..1927 | CDD:375836 | 58/65 (89%) | ||
HECTc | 2101..2578 | CDD:238033 | 429/476 (90%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 1220 | 1.000 | Domainoid score | I337 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H9115 | |
Inparanoid | 1 | 1.050 | 4574 | 1.000 | Inparanoid score | I68 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10145at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006411 | |
OrthoInspector | 1 | 1.000 | - | - | oto212361 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4675 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.060 |