DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zip48C and Slc39a13

DIOPT Version :9

Sequence 1:NP_610712.1 Gene:Zip48C / 36273 FlyBaseID:FBgn0033665 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_038960439.1 Gene:Slc39a13 / 295928 RGDID:1304695 Length:395 Species:Rattus norvegicus


Alignment Length:378 Identity:81/378 - (21%)
Similarity:130/378 - (34%) Gaps:106/378 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALLGTLLTWGLTAAGAALVI-FVRGNQRRS------LDAALGFAAGVMIAASFWSLL-------- 60
            :|||:|:. ||:.....||| ...|...:|      |...|.||.|.::...|..||        
  Rat    71 SLLGSLMV-GLSGVFPLLVIPLEMGTMLQSEAGAWRLKQLLSFALGGLLGNVFLHLLPEAWAYTC 134

  Fly    61 --KPAIE--MAESSHLYGVYAFLPVAGGFLLGSIFVYGCDKLMSYLGLNSTNMMIQMTQSKAKAD 121
              .|.:|  ..:.....|::    |..|||             ::|.|.  .|.:...:      
  Rat   135 NISPGVEGQSLQRQQQLGLW----VIAGFL-------------TFLALE--KMFLNCKE------ 174

  Fly   122 IAIEDSKRNGVAPDRLASKSLDSFSDCLSVQHSGESRRRKKGASINEMEQCTYTTPEEQQRAEDA 186
               ||..:   ||.:..:.:..:...||: |.:.|...|....::.....|  ..|....|||..
  Rat   175 ---EDPSQ---APSKDPTAAALNGGHCLA-QPAAEPGLRAVVRNLKVSGPC--GPPSCSCRAEWL 230

  Fly   187 L------SQWKRIMLLV------VAITVHNIPEGLAVGVSF---GAIGSTNSSTFESARNLAIGI 236
            .      |.|...::.|      :|.|:.|...||||..||   ..||...:          :.|
  Rat   231 TQLCLPGSAWLSPLIQVSGYLNLLANTIDNFTHGLAVAASFLVSKKIGLLTT----------MAI 285

  Fly   237 GIQNFPEGLAVSLPLHAAGFSVKRALWYGQLSGMVEPIFGVLGAVAVTFA---------NLILPY 292
            .:...|..:.....|..|||.    .|..........:.|:|||   .||         ...:.:
  Rat   286 LLHEIPHEVGDFAILLRAGFD----RWTAAKLQFSTALGGLLGA---CFAICTQSPKGVEETVVW 343

  Fly   293 ALSFAAGAMIYIVSDDILPEAHASGNGTIATWGTV-------SGFLIMMCLEV 338
            .|.|.:|..:|:...::||:.....:    .|.::       ||.::|:.|.:
  Rat   344 TLPFTSGGFLYVALVNVLPDLLEEDD----PWHSLQQVLLLCSGIVVMVLLSL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zip48CNP_610712.1 ZupT 23..340 CDD:223505 75/366 (20%)
Slc39a13XP_038960439.1 Zip 65..390 CDD:396884 80/374 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.