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Protein Alignment MCPH1 and F42A6.5
DIOPT Version :9
Sequence 1: | NP_001163123.1 |
Gene: | MCPH1 / 36272 |
FlyBaseID: | FBgn0260959 |
Length: | 1028 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_500323.2 |
Gene: | F42A6.5 / 185649 |
WormBaseID: | WBGene00018327 |
Length: | 102 |
Species: | Caenorhabditis elegans |
Alignment Length: | 85 |
Identity: | 26/85 - (30%) |
Similarity: | 37/85 - (43%) |
Gaps: | 27/85 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 912 RFMEPFYVSSLCRPVQFN---NMKELLLL----GGATLT--ENRFKAK-YIIGDK--RRAEDDRV 964
||| :.|.:..| :.|:|:.| ||..|: ||....| |||..| :..|:.:.
Worm 19 RFM-------ILRKLTMNPYFDYKQLIELVQQCGGEILSCYENLSPEKLYIIFSKHSKAIEESKN 76
Fly 965 YLDPY--------WVLDSIT 976
..:.| ||||||:
Worm 77 IENLYKCDVVTMEWVLDSIS 96
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MCPH1 | NP_001163123.1 |
PTCB-BRCT |
187..251 |
CDD:289507 |
|
BRCT |
812..873 |
CDD:237994 |
|
F42A6.5 | NP_500323.2 |
BRCT |
13..95 |
CDD:214602 |
24/82 (29%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4362 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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