DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1alpha1 and 42Sp50

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001011438.1 Gene:42Sp50 / 496924 XenbaseID:XB-GENE-5853280 Length:463 Species:Xenopus tropicalis


Alignment Length:454 Identity:302/454 - (66%)
Similarity:378/454 - (83%) Gaps:2/454 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
            :|.|:|:|:|||||||||||||||||||||.|.|.:||.|..|.::||||||:||:|||||||||
 Frog     7 QKTHLNVVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKGSFKFAWILDKLKAERE 71

  Fly    69 RGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133
            |||||||:||||:|.::.:|||||||||||||||||||||||.|:|:|:|.|||||||:|:||||
 Frog    72 RGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQT 136

  Fly   134 REHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 198
            |||||||:|:||||:||.|||||.::||||..|::|:.:.|:.|:|||||||..:.|||:|||.|
 Frog   137 REHALLAYTMGVKQMIVCVNKMDLTDPPYSHKRFDEVVRNVTVYLKKIGYNPTTIPFVPVSGWTG 201

  Fly   199 DNMLEPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIGTVP 263
            :|:..||..|.|||||||:||:|...|::|::.|||::||.||.:|.||||||||||||||||||
 Frog   202 ENISSPSQKMGWFKGWKVKRKDGFTKGQSLLEVLDALVPPVRPANKPLRLPLQDVYKIGGIGTVP 266

  Fly   264 VGRVETGVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGD 328
            ||::|||:||||..:.|||:....||||:|||||.||.|.||.||||||||::||.|:||.|||:
 Frog   267 VGKIETGILKPGMTITFAPSGFAAEVKSIEMHHEPLQTAFPGFNVGFNVKNIAVKSLKRGNVAGN 331

  Fly   329 SKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKF 393
            ||::||..|:.||||||:|||||.|..||:||:|||||||.|:|.|::||:|||:||..|:||..
 Frog   332 SKSDPPTEASSFTAQVIILNHPGLIKAGYSPVIDCHTAHITCQFTELQEKIDRRTGKKLEDNPGV 396

  Fly   394 IKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVTKAAEK 457
            :|||||||:.|.|.||.|||.|.::|||||||.||::|||||||:|:|..|  :|....:.|:|
 Frog   397 LKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHK--AGAAARRQAQK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 301/452 (67%)
42Sp50NP_001011438.1 PTZ00141 7..447 CDD:185474 298/439 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62187
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

Return to query results.
Submit another query.