DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha1 and mEFTu1

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001163144.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster


Alignment Length:495 Identity:145/495 - (29%)
Similarity:222/495 - (44%) Gaps:117/495 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
            :.|.|.|:..|||||.||:|.|       ..|.|...:|...|:::..:        :|....|:
  Fly    78 RTKPHCNVGTIGHVDHGKTTLT-------AAITKVLADKQLAESKKYNE--------IDNAPEEK 127

  Fly    68 ERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
            .|||||::|..:::|...:....|.|||.|:||||||||:|.|.|:|:|||..|...       |
  Fly   128 ARGITINVAHVEYQTETRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMP-------Q 185

  Fly   133 TREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 197
            ||||.|||..:|:..::|.:||:|:::    |...:.::.|:...:.::||:             
  Fly   186 TREHMLLAKQIGIDHIVVFINKVDAAD----EEMVDLVEMEIRELLTEMGYD------------- 233

  Fly   198 GDNMLEPSTNMPWFKGWKVERKEGNAD--GK----TLIDALDAILP-PARPTDKALRLPLQDVYK 255
            ||       .:|..||..:...|..:.  ||    .|:..:|:.:| |.|..||...||:::||.
  Fly   234 GD-------KIPVVKGSALCALEDKSPEIGKEAILKLLQEVDSFIPTPVRELDKPFLLPVENVYS 291

  Fly   256 IGGIGTVPVGRVETGVLKPGTVVVFAPAN--ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 318
            |.|.|||..||:|.||:|.|....|...|  :.:.|..|||.|:.|:||..||.:|..|:.|...
  Fly   292 IPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQILEEAQAGDQLGALVRGVKRD 356

  Fly   319 ELRRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYT-PVLDCHTAHIACKFAEIKEKVDRR 382
            :::||.|.  .|....|......|||.:|:   :...|.| |.:         .|.:::      
  Fly   357 DIKRGMVM--CKPGSVKALDQLEAQVYILS---KDEGGRTKPFM---------SFIQLQ------ 401

  Fly   383 SGKTTEENPKFIKSGDAAIVNLVPSK-----------------PLCVEAFQEFPPLGRFAVRDMR 430
                     .|.::.|.|:...:|.|                 |:.:|..|      ||.:||..
  Fly   402 ---------MFSRTWDCAVQVQIPDKEMVMPGEDTKLILRLIRPMVLEQGQ------RFTLRDGN 451

  Fly   431 QTVAVGVIKAV-------NFKDASGGKVTKAAEKATKGKK 463
            .|:..||:.:.       ...:.:.||  ||.||....||
  Fly   452 LTLGTGVVTSTLPPLTESQRSELTEGK--KAREKKVAAKK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 141/487 (29%)
mEFTu1NP_001163144.1 PRK00049 73..463 CDD:234596 137/465 (29%)
EF_Tu 81..274 CDD:206671 73/238 (31%)
EFTU_II 282..368 CDD:293898 35/87 (40%)
mtEFTU_III 371..462 CDD:294005 24/123 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464544
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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