DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha1 and mEFTu2

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster


Alignment Length:469 Identity:114/469 - (24%)
Similarity:195/469 - (41%) Gaps:119/469 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV--LDKLKA 65
            :|..|.|:..|||||.||:|.|.            .|.:.:.:     ||..:|...  :|:...
  Fly    53 RELPHCNVGTIGHVDHGKTTLTA------------AITRIQSQ-----KGLAEYLSYDQIDRAPE 100

  Fly    66 ERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 130
            |:.|||||:.....:.|.:......|.|||.|:|||||:|.||.|.|:|:|||..|:..      
  Fly   101 EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP------ 159

  Fly   131 GQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISG 195
             |||||.|||..:|::::||.:||.|..:....|....|:::.:|.:                 |
  Fly   160 -QTREHLLLAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDF-----------------G 206

  Fly   196 WHGDNMLEPSTNMPWFKG-----WKVERKE-GNADGKTLIDALDAILP-PARPTDKALRLPLQDV 253
            :.|       .|.|...|     .:.::.| |....:.|::..|:.:| |.|.......||:.:.
  Fly   207 FDG-------VNSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNA 264

  Fly   254 YKIGGIGTVPVGRVETGVLKPGTVVVFAPA-------NITTEVKSVEMHHEALQEAVPGDNVGFN 311
            :.:.|.|||.|     |.:|.||:...|.|       |:.|.:..:::..:::.:|..|:|||..
  Fly   265 FTVPGRGTVVV-----GTIKRGTIPRNADADLLGFNQNLKTSISDIQIFRKSVPQAQAGENVGAL 324

  Fly   312 VKNVSVKELRRGYVAGDSKANPPKGAAD----FTAQVIVLNHPGQIANG--YTPVLDCHTAHIAC 370
            ::.:.:..:.||.:...:      |:.|    |...:.:|:.    |.|  ..|:|..:...:..
  Fly   325 LRGIKISAVERGMLLCAT------GSEDISNHFEGSMYLLSR----AEGGRVKPMLSKYIQQLFS 379

  Fly   371 KFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEA-----------FQEFPPLGRF 424
            :...:..::|                       :|||:.:.:..           .....|...|
  Fly   380 QTWNVPARID-----------------------IVPSEAMLMPGEHGQVRVTLLRKMVMTPGQAF 421

  Fly   425 AVRDMRQTVAVGVI 438
            .:|:...|||.|::
  Fly   422 TIRENGATVATGMV 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 114/469 (24%)
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 114/469 (24%)
EF_Tu 56..249 CDD:206671 70/240 (29%)
EFTU_II 257..343 CDD:293898 22/96 (23%)
mtEFTU_III 347..437 CDD:294005 17/116 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464589
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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