DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha1 and eEF2

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster


Alignment Length:586 Identity:121/586 - (20%)
Similarity:185/586 - (31%) Gaps:247/586 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 65
            |.|::...|:.||.|||.||||.|..|:.|.|.|          ...:.|:..|     .|..|.
  Fly    13 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGAKAGETRF-----TDTRKD 62

  Fly    66 ERERGITID---IALWKFETAK------------------YYVTIIDAPGHRDFIKNMITGTSQA 109
            |:||.|||.   |::: ||..:                  :.:.:||:|||.||...:.......
  Fly    63 EQERCITIKSTAISMY-FEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVT 126

  Fly   110 DCAVLIVAAGTGEFEAGISKNGQT------------------REHALLAFTLGVKQL-------I 149
            |.|:::|     :..:|:....:|                  .:.|||...|..::|       :
  Fly   127 DGALVVV-----DCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV 186

  Fly   150 VGVN----------------KMDSSE----------------PPYSEARYEEIKKEVSSYIKKIG 182
            ..||                ::|.|:                ..:||...|:.|.:|...:.:: 
  Fly   187 ENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRL- 250

  Fly   183 YNPAAVAFVPISGWHGDNMLEPSTNMPWFKGWKVERKEGNADGKT-----LIDAL----DAILPP 238
                         | |:|.....|     |.|   :|:..||.|.     ::|.:    |||:. 
  Fly   251 -------------W-GENFFNAKT-----KKW---QKQKEADNKRSFCMYILDPIYKVFDAIMN- 292

  Fly   239 ARPTDKALRLPLQDVYKIGGIGT-----------------------------VPVGRVETGVLKP 274
                           ||...|||                             :|.|.   .:|: 
  Fly   293 ---------------YKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGE---ALLQ- 338

  Fly   275 GTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAAD 339
             .:.:..|:.:..:...:||    |.|....|.....||:.........|:   ||..|......
  Fly   339 -MIAIHLPSPVVAQKYRMEM----LYEGPHDDEAAIAVKSCDPDGPLMMYI---SKMVPTSDKGR 395

  Fly   340 FTAQVIVLNHPGQIANG---------YTPVLDCHTAHIACKFAEIKEKVDRRS----GKTTEENP 391
            |.|...|.  .|::|.|         |||          .|..::.||..:|:    |:..|   
  Fly   396 FYAFGRVF--AGKVATGQKCRIMGPNYTP----------GKKEDLYEKAIQRTILMMGRYVE--- 445

  Fly   392 KFIKSGDAAIVNLVPSKPLC----VEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
                     .:..|||..:|    |:.|                .|..|.|  ..||||...||.
  Fly   446 ---------AIEDVPSGNICGLVGVDQF----------------LVKTGTI--TTFKDAHNMKVM 483

  Fly   453 K 453
            |
  Fly   484 K 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 121/586 (21%)
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 121/586 (21%)
EF2 20..236 CDD:206672 51/236 (22%)
EF2_snRNP_like_II 380..474 CDD:293901 28/138 (20%)
EF2_snRNP_III 489..560 CDD:293918
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464627
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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