DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha1 and sup35

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_588225.1 Gene:sup35 / 2539479 PomBaseID:SPCC584.04 Length:662 Species:Schizosaccharomyces pombe


Alignment Length:447 Identity:166/447 - (37%)
Similarity:263/447 - (58%) Gaps:25/447 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 66
            |||  |:|||.|||||:||||..|::::..|.:||||:||.|:||:|.||.|:..:|.||....|
pombe   235 GKE--HVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEE 297

  Fly    67 RERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131
            ||:|.|:::....|||.....:::|||||:.::.|||.|.||||..||:::|..||||||..:.|
pombe   298 REKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362

  Fly   132 QTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKI-GYNPAA-VAFVPIS 194
            ||||||:||.|.|:..|:|.:||||.....:||.||:|...::|.::::: |||... |.::|:|
pombe   363 QTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVS 427

  Fly   195 GWHGDNMLE--PSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIG 257
            .:.|.|:.:  .|:..||::            |.:|::.||::....|..:....:|:...||  
pombe   428 AYTGQNVKDRVDSSVCPWYQ------------GPSLLEYLDSMTHLERKVNAPFIMPIASKYK-- 478

  Fly   258 GIGTVPVGRVETGVLKPGTVVVFAPANITTEVKSV-EMHHEALQEAVPGDNVGFNVKNVSVKELR 321
            .:||:..|::|.|.:|..:.|:..|.|.|.||.:: :...|.:..::.||.|...|:. ...:::
pombe   479 DLGTILEGKIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEEISSSICGDQVRLRVRG-DDSDVQ 542

  Fly   322 RGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKT 386
            .|||...:| ||......|.||:.:|..|..:..||:.|:..|||.....||::..|:|:.:.| 
pombe   543 TGYVLTSTK-NPVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRK- 605

  Fly   387 TEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVG-VIKAVN 442
            :::.|.|...|...|..|....|:|:|.|:::..:|||.:||...||||| |:|.::
pombe   606 SKKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKILD 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 166/447 (37%)
sup35NP_588225.1 TEF1 236..662 CDD:227581 165/444 (37%)
EF1_alpha 240..462 CDD:206670 98/233 (42%)
eRF3_II_like 468..549 CDD:293899 23/83 (28%)
eRF3_C_III 555..660 CDD:294003 36/105 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
TreeFam 00.000 Not matched by this tool.
32.810

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