DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha1 and ZK1236.1

DIOPT Version :9

Sequence 1:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_498863.1 Gene:ZK1236.1 / 176191 WormBaseID:WBGene00022862 Length:645 Species:Caenorhabditis elegans


Alignment Length:394 Identity:96/394 - (24%)
Similarity:153/394 - (38%) Gaps:129/394 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
            :||. |..::.|||.||||....|:..||.:...     :|:             :||||:.|||
 Worm    40 DKIR-NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85

  Fly    69 RGITIDIALWKFETAK-----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 128
            ||||:     |.:||.     |.:.:||.|||.||...:....:..|..:|:|||..|       
 Worm    86 RGITV-----KAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138

  Fly   129 KNGQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKI-GYNPAAVAFVP 192
            ...||..:..|||...: |:|..:||:|.   |.::.      |.|.:.:|.: .:||.....:.
 Worm   139 VQAQTIANFWLAFEKNI-QIIPVINKIDL---PGADI------KSVETQLKNLFEFNPEECLHIS 193

  Fly   193 I-SGWHGDNMLE---------------PSTNMPW------FKG--WKVERKEGNADGKTLIDALD 233
            . ||.:.|.:||               |..:|.:      |:|  ..:..|||:           
 Worm   194 AKSGLNVDKVLEAIIDRVPAPTAIIDAPFRSMIFDSYFDHFRGAIAHIMVKEGS----------- 247

  Fly   234 AILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGTV-----------------VVFA 281
                 .:..||......:.||.:..:|.:....|:...|:.|.|                 .:||
 Worm   248 -----VKKGDKIQSYQNEKVYDVSEVGVMRPEMVKCTELRAGQVGYLVCNMRTVNEAVVGETLFA 307

  Fly   282 PA----NITT--EVKSVE------------MHHEALQEAVPGDNVGFNVKNVSV-----KELRRG 323
            ..    ::.|  |:|.|:            ..:|:|::||  :.:..|..:|:|     |.|..|
 Worm   308 ETTSRDSVKTFAEIKGVKPTVYAGLFPVETSDYESLKQAV--ERLCLNDPSVTVIPDSSKALGLG 370

  Fly   324 YVAG 327
            :..|
 Worm   371 WRIG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 96/394 (24%)
ZK1236.1NP_498863.1 PRK05433 39..644 CDD:235462 96/394 (24%)
LepA 43..214 CDD:206677 61/211 (29%)
EF4_II 222..305 CDD:293900 15/98 (15%)
EF4_III 326..401 CDD:293917 11/51 (22%)
lepA_C 445..523 CDD:239680
LepA_C 532..644 CDD:283959
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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