DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERp60 and tmx4

DIOPT Version :10

Sequence 1:NP_725084.2 Gene:ERp60 / 36270 FlyBaseID:FBgn0033663 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001034826.1 Gene:tmx4 / 496882 XenbaseID:XB-GENE-992676 Length:366 Species:Xenopus tropicalis


Alignment Length:109 Identity:31/109 - (28%)
Similarity:56/109 - (51%) Gaps:7/109 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 DAPVKVAVAKNFDDLVINNGKDTLIEFYAPWCGHCKKLSPIYEELAEKLQDEDVAIVKMDATAN- 426
            ::.|:...:.|:..|:..   :.:|:||||||..|:::...:|..||:.....|.:.|:|.|.. 
 Frog    44 ESGVRAVTSTNWSALLEG---EWMIKFYAPWCPACQQIQSAWESFAERSHALGVKVGKVDVTEEP 105

  Fly   427 DVPPEFNVRGFPTLFWLPKDAKNKPVSYNGGREVDDFLKYIAKE 470
            .:...|.|...||:|. .||...:  .|:|.|.|:|...:|:::
 Frog   106 GLSGRFFVTTLPTIFH-AKDGVFR--RYHGSRMVEDLQTFISEK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERp60NP_725084.2 ER_PDI_fam 23..479 CDD:273457 31/109 (28%)
tmx4NP_001034826.1 PDI_a_TMX 45..145 CDD:239292 31/105 (30%)

Return to query results.
Submit another query.