DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERp60 and Erp44

DIOPT Version :9

Sequence 1:NP_725084.2 Gene:ERp60 / 36270 FlyBaseID:FBgn0033663 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001008318.1 Gene:Erp44 / 298066 RGDID:1309176 Length:406 Species:Rattus norvegicus


Alignment Length:470 Identity:108/470 - (22%)
Similarity:175/470 - (37%) Gaps:148/470 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLGFIAISSGAEQDVLELGDDDFATTLKQHETTLVMFYAPWCGHCKRLKPEYAKAAEIVKDDDP 73
            |||...:|.:....::..|..::....|...:..||.|||.||...:.|.|.:.:|::::|::.|
  Rat    16 LLLLVTSIFAPITAEIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYP 80

  Fly    74 ---PIKLAKVDCTEAGKETCSKYSVSGYPTLKIFRQD-EVSQDYNGPREASGIAKYMRAQVGPAS 134
               .:..|:||| :...:...:|.:|.|||||:||.. .:.::|.|.|....:|.|:|.|.....
  Rat    81 DKNQVVFARVDC-DQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPV 144

  Fly   135 KTVRTVAELKKFLDTKDTTLFGYFSDSDSKLAKIFLK--------------FADKNR-EKYRFGH 184
            ..::::.|:.. ||.....:.|||...||...::|.:              |.|.:: |:|    
  Rat   145 HEIQSLDEVTN-LDRSKRNIIGYFEQKDSDNYRVFERVASILHDDCAFLSAFGDLSKPERY---- 204

  Fly   185 SSEKEVLDKQGET---------------------DKIV-LIRAPHLSNKFESSSIKFEGSSESDL 227
            |.:..:....|.:                     ||.| |:|           .|.||...|   
  Rat   205 SGDNLIYKPPGRSVPDMVYLGSMTNFDVTFNWIQDKCVPLVR-----------EITFENGEE--- 255

  Fly   228 STFVKENFHGLV-GHRTQD--SVKDFQNPLITAYYSVDYQKNPKGTNYWRNRVLKVAKEFV---G 286
              ..:|....|: .|..:|  |::.|||                          :||::.:   |
  Rat   256 --LTEEGLPFLILFHMKEDTESLEIFQN--------------------------EVARQLISEKG 292

  Fly   287 QINFAIASKDDFQHELNEYGYDFVGDKPVVLARDEKNLKYALKDEFSVENLQDFVEKLLANELEP 351
            .|||..|..|.|:|.|... .....|.||: |.|.....|.         ..||.:.|:..:|:.
  Rat   293 TINFLHADCDKFRHPLLHI-QKTPADCPVI-AIDSFRHMYV---------FGDFKDVLIPGKLKQ 346

  Fly   352 YIKSEPIPESNDAPVKVAVAKNFDDLVINNGKDTLIEFYAPWCGHCKKLSPIYEELAEKLQDEDV 416
            ::                    ||   :::|| ...||:     |    .|...:.|...||:||
  Rat   347 FV--------------------FD---LHSGK-LHREFH-----H----GPDPTDTAPGEQDQDV 378

  Fly   417 AIVKMDATANDVPPE 431
            |         ..|||
  Rat   379 A---------SSPPE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERp60NP_725084.2 ER_PDI_fam 23..479 CDD:273457 104/456 (23%)
PDI_a_PDIR 23..126 CDD:239295 31/106 (29%)
PDI_b_ERp57 133..235 CDD:239367 25/138 (18%)
PDI_b'_ERp72_ERp57 239..345 CDD:239371 25/111 (23%)
PDI_a_PDI_a'_C 365..467 CDD:239293 17/67 (25%)
Erp44NP_001008318.1 PDI_a_ERp44 29..136 CDD:239294 31/107 (29%)
PDI_b_ERp44 144..234 CDD:239368 15/94 (16%)
Thioredoxin_6 167..350 CDD:290560 48/259 (19%)
PDI_b'_ERp44 245..355 CDD:239370 36/185 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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