DRSC/TRiP Functional Genomics Resources

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Protein Alignment ERp60 and trx-1

DIOPT Version :9

Sequence 1:NP_725084.2 Gene:ERp60 / 36270 FlyBaseID:FBgn0033663 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001021885.1 Gene:trx-1 / 181863 WormBaseID:WBGene00015062 Length:115 Species:Caenorhabditis elegans


Alignment Length:79 Identity:31/79 - (39%)
Similarity:42/79 - (53%) Gaps:8/79 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DFATTLKQHETTLVM--FYAPWCGHCKRLKPEYAKAAEIVKDDDPPIKLAKVDCTEAGKETCSKY 93
            ||...::||...:::  |||.|||.||.:.|.|.:.|...|.    |...|||..|| ::.||||
 Worm    17 DFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELATTHKG----IIFCKVDVDEA-EDLCSKY 76

  Fly    94 SVSGYPTLKIFRQD 107
            .|...||. ||.::
 Worm    77 DVKMMPTF-IFTKN 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERp60NP_725084.2 ER_PDI_fam 23..479 CDD:273457 31/79 (39%)
PDI_a_PDIR 23..126 CDD:239295 31/79 (39%)
PDI_b_ERp57 133..235 CDD:239367
PDI_b'_ERp72_ERp57 239..345 CDD:239371
PDI_a_PDI_a'_C 365..467 CDD:239293
trx-1NP_001021885.1 Thioredoxin 16..111 CDD:278513 31/79 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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